DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016500
GenePmf1
Synonyms
Desc.polyamine-modulated factor 1
LocusNM_025928 chr3:88198065-88214238(-)
DB links


Entrez 67037
MGI 1914287
Ensembl ENSMUSG00000028066
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2016984
(v2.0)
Pmf1NM_02592867037
12.381824.604139.73456.85989.834961.603834.067255.026712.575881.9004
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016500
(v1.0)
Pmf167037
Minor ZGA0.9791
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016984
(v2.0)
Pmf167037
670/484-0.0436387/484-0.437887/4841.1059180/484-0.09529/484-3.5515130/484-2.4821
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2016984
(v2.0)
Pmf167037
287/1850.1201173/185-0.211776/1852.2448159/1851.10233/185-3.505751/185-2.4239
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016984
(v2.0)
Pmf167037
79.384514255.9
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2016984
(v2.0)
Pmf167037
29.0348733.37
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016500
(v1.0)
Pmf1NM_02592867037
25.582427.46455.118086.8215224.5088
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016500
(v1.0)
Pmf1NM_02592867037
32.628934.03916.7480310.633336.4061
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016500
(v1.0)
Pmf1NM_02592867037
26.74874.5281429.9644
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016500
(v1.0)
Pmf1NM_02592867037
26.109427.188840.8664
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016500
(v1.0)
Pmf1NM_02592867037
103.54127.014
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016500
(v1.0)
Pmf1NM_02592867037
26.76434.4661244.8208
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016500
(v1.0)
Pmf1NM_02592867037
4.738546.586458.71085
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016500
(v1.0)
Pmf1NM_02592867037
9.5457819.2859
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016500
(v1.0)
Pmf1NM_02592867037
17.02116.4325
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016500
(v1.0)
Pmf1NM_02592867037
55.95638.7922
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016500
(v1.0)
595C0119H03-3Mm.367152600009M07Rik67037
U024251NAP002869-0012600009M07Rik;TC825858,TC808690Q924B34.10114.36494.70974.44844.03114.35134.2633
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016500
(v1.0)
1438173_x_atMm.36715Pmf1NM_025928.367037
487.950000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016500
(v1.0)
A_51_P438865Pmf1NM_02592867037
11P1.5680.139P
Proteome N/A