DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016592
GenePolr2k
SynonymsABC10-alpha
MafY
Mt1a
RPABC4
RPB10alpha
RPB12
RPB7.0
Desc.polymerase (RNA) II (DNA directed) polypeptide K
LocusNM_001039368 chr15:36103772-36106767(+)
NM_023127 chr15:36103772-36106762(+)
DB links


Entrez 17749
MGI 102725
Ensembl ENSMUSG00000045996
Vega OTTMUSG00000042372
Featureprotein-coding
GO(BP)
  •   1 Terms
      transcription from RNA polymerase II promoter (GO:0006366)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017078
(v2.0)
Polr2kNM_001039368,NM_02312717749
41.726428.67595.34638.439487.401686.244518.1394.4298872.8134104.545
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016592
(v1.0)
Polr2k17749
MGA0.93484
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017078
(v2.0)
Polr2k17749
538/3300.1918432/3300.2716316/3303.4911107/3303.0677101/3300.3458586/3300.2284
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017078
(v2.0)
Polr2k17749
258/1200.5875207/1200.666288/1204.7301911/1204.227320/120-0.50677/120-1.2233
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017078
(v2.0)
Polr2k17749
34.69679536.52
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017078
(v2.0)
Polr2k17749
9.37896115.38
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016592
(v1.0)
Polr2kNM_001039368,NM_02312717749
31.02883.8156429.828362.677213.2322
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016592
(v1.0)
Polr2kNM_001039368,NM_02312717749
6.07541.004625.26197.838221.11177
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016592
(v1.0)
Polr2kNM_001039368,NM_02312717749
32.443515.84034.16294
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016592
(v1.0)
Polr2kNM_001039368,NM_02312717749
31.66813.777333.30055
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016592
(v1.0)
Polr2kNM_001039368,NM_02312717749
1.020330.965373
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016592
(v1.0)
Polr2kNM_001039368,NM_02312717749
32.462315.62343.61993
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016592
(v1.0)
Polr2kNM_001039368,NM_02312717749
27.616460.517352.3455
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016592
(v1.0)
Polr2kNM_001039368,NM_02312717749
7.752614.2968
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016592
(v1.0)
Polr2kNM_001039368,NM_02312717749
21.1093111.309
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016592
(v1.0)
Polr2kNM_001039368,NM_02312717749
0.7488821.54561
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016592
(v1.0)
1452596_atMm.27375Polr2kNM_001039368.1,NM_023127.217749
1209.95247.725362.351002.5472.7
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016592
(v1.0)
A_51_P214449Polr2kNM_02312717749
11P0.2880.0622P
Proteome N/A