DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016600
GenePolr3f
SynonymsRPC39
RPC6
Desc.polymerase (RNA) III (DNA directed) polypeptide F
LocusNM_029763 chr2:144353481-144367515(+)
DB links


Entrez 70408
MGI 1924086
Ensembl ENSMUSG00000027427
Vega OTTMUSG00000004234
Featureprotein-coding
GO(BP)
  •   5 Terms
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017086
(v2.0)
Polr3fNM_02976370408
2.3186817.139130.23123.327525.09815.631125.0981825.326919.10475.41421
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016600
(v1.0)
Polr3f70408
Minor ZGA0.98378
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017086
(v2.0)
Polr3f70408
686/3600.4164487/3600.3189141/3602.2111382/3601.4106201/3601.2076805/3600.5604
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017086
(v2.0)
Polr3f70408
380/1960.4404212/196-0.003133/1962.9658358/1962.18654/1960.1941266/196-0.1579
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017086
(v2.0)
Polr3f70408
59.324914840.08
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017086
(v2.0)
Polr3f70408
25.615211322.67
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016600
(v1.0)
Polr3fNM_02976370408
17.809320.901117.350517.36273.58806
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016600
(v1.0)
Polr3fFR381107,NM_02976370408
51.224564.466748.371152.82488.40699
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016600
(v1.0)
Polr3fNM_02976370408
18.62130.84796422.8036
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016600
(v1.0)
Polr3fNM_02976370408
18.176220.691318.77
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016600
(v1.0)
Polr3fFR381107,NM_02976370408
145.663221.825
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016600
(v1.0)
Polr3fNM_02976370408
18.63210.83634920.5863
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016600
(v1.0)
Polr3fNM_02976370408
16.063816.764413.1881
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016600
(v1.0)
Polr3fFR381107,NM_02976370408
52.254541.135
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016600
(v1.0)
Polr3fNM_02976370408
10.76962.71702
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016600
(v1.0)
Polr3fNM_02976370408
0.7936711.20124
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016600
(v1.0)
465C0110C03-3Mm.2067822810411G20Rik70408
U002573NAP002322-0012810411G20Rik;TC882101Q9CZ23U,F,22.47162.61122.60192.82682.68212.79782.7431
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016600
(v1.0)
1451773_s_atMm.389351Polr3fNM_029763.370408
65.7574.474.47542.0542.525
0016600
(v1.0)
1439075_atMm.389351Polr3fNM_029763.370408
42.8113.2561.77562.17528.35
0016600
(v1.0)
1429686_atMm.389351Polr3fNM_029763.370408
0521.125335.77500
0016600
(v1.0)
1430328_atMm.389351Polr3fNM_029763.370408
000283.2750
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016600
(v1.0)
A_51_P332580Polr3fNM_02976370408
11P0.7030.353P
Proteome N/A