DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016706
GenePpp1ca
Synonymsdism2
Ppp1c
Desc.protein phosphatase 1, catalytic subunit, alpha isoform
LocusNM_031868 chr19:4192174-4195419(+)
DB links


Entrez 19045
MGI 103016
Ensembl ENSMUSG00000040385
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017196
(v2.0)
Ppp1caNM_03186819045
215.6554.075885.632144.264168.385343.19311.828106.784148.586365.239
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016706
(v1.0)
Ppp1ca19045
Major ZGA0.98296
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017196
(v2.0)
Ppp1ca19045
705/552-0.1596343/552-0.8007177/5521.9369500/5521.184932/552-2.0172332/552-1.3289
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017196
(v2.0)
Ppp1ca19045
310/2050.0834154/205-0.5258120/2052.7575319/2051.956114/205-1.7438174/205-0.8304
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017196
(v2.0)
Ppp1ca19045
92.516315260.87
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017196
(v2.0)
Ppp1ca19045
22.93557929.03
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016706
(v1.0)
Ppp1caNM_03186819045
56.212759.3846107.323116.625223.171
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016706
(v1.0)
Ppp1caNM_03186819045
75.797168.6703143.306149.121263.694
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016706
(v1.0)
Ppp1caNM_03186819045
58.775678.865664.7898
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016706
(v1.0)
Ppp1caNM_03186819045
57.370858.788379.2331
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016706
(v1.0)
Ppp1caNM_03186819045
154.12183.651
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016706
(v1.0)
Ppp1caNM_03186819045
58.809777.785486.9001
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016706
(v1.0)
Ppp1caNM_03186819045
99.3639112.606102.783
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016706
(v1.0)
Ppp1caNM_03186819045
221.208180.856
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016706
(v1.0)
Ppp1caNM_03186819045
25.902132.2015
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016706
(v1.0)
Ppp1caNM_03186819045
58.908233.7464
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016706
(v1.0)
1275C0192D01-3Mm.1970Ppp1ca19045
U038749NAP121082-001Ppp1ca;TC798228,TC798225Q9Z0F6U,F,23.14253.3833.20653.49043.00783.38683.3883
0016706
(v1.0)
5901H3012B06-5Ppp1ca19045
U038749NAP121082-001Ppp1ca;TC798232,TC798228,TC798227,TC798225Q9Z0F6U,F,23.37793.3853.31353.32673.31143.31133.397
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016706
(v1.0)
1460165_atMm.1970Ppp1caNM_031868.219045
411.4356.625811.55522.8251473.325
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016706
(v1.0)
A_51_P509389Ppp1caNM_03186819045
11P1.180.346P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016706
(v1.0)
Ppp1ca19045
645765