DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016707
GenePpp1cb
Synonyms
Desc.protein phosphatase 1, catalytic subunit, beta isoform
LocusNM_172707 chr5:32761343-32796085(+)
DB links


Entrez 19046
MGI 104871
Ensembl ENSMUSG00000014956
Vega OTTMUSG00000024328
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017197
(v2.0)
Ppp1cbNM_17270719046
22.994119.912751.010549.537731.504488.582394.444130.930427.156588.9417
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016707
(v1.0)
Ppp1cb19046
Minor ZGA0.90381
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017197
(v2.0)
Ppp1cb19046
649/3290.4661478/3290.4216143/3292.3568578/3292.1358124/3290.6435512/3290.0386
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017197
(v2.0)
Ppp1cb19046
323/1400.6894213/1400.4863127/1403.3519481/1403.089227/140-0.3064128/140-0.7219
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017197
(v2.0)
Ppp1cb19046
30.360414720.65
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017197
(v2.0)
Ppp1cb19046
8.00521117.21
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016707
(v1.0)
Ppp1cbNM_17270719046
20.691635.145236.859821.864266.866
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016707
(v1.0)
Ppp1cbFR035183,NM_17270719046
139.118226.929282.041150.239385.936
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016707
(v1.0)
Ppp1cbNM_17270719046
21.6358.4091638.3441
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016707
(v1.0)
Ppp1cbNM_17270719046
21.117934.792322.9443
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016707
(v1.0)
Ppp1cbFR035183,NM_17270719046
682.2671330.68
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016707
(v1.0)
Ppp1cbNM_17270719046
21.64758.2939925.1646
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016707
(v1.0)
Ppp1cbNM_17270719046
34.126421.110818.7095
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016707
(v1.0)
Ppp1cbFR035183,NM_17270719046
382.499396.725
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016707
(v1.0)
Ppp1cbNM_17270719046
36.298740.1835
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016707
(v1.0)
Ppp1cbNM_17270719046
7.6712130.3787
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016707
(v1.0)
11645H3121A04-3Mm.4572Ppp1cb19046
U005461NAP004095-001Ppp1cb;TC829970,TC829964P37140U,F,24.17884.17573.27793.35153.67023.87584.3577
0016707
(v1.0)
21722L0906E08-3Ppp1cb19046
U005461NAP004095-001Ppp1cb;TC829970P37140U,F,22.83642.78222.69342.56782.57922.5472.4394
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016707
(v1.0)
1426205_atMm.241931Ppp1cbNM_172707.319046
209.7342.8360.325265.175693.85
0016707
(v1.0)
1431328_atMm.241931Ppp1cbNM_172707.319046
91.4204.225120.175143.025125
0016707
(v1.0)
1433540_x_atMm.241931Ppp1cbNM_172707.319046
258.25488.175568.5468.9770.25
0016707
(v1.0)
1456462_x_atMm.241931Ppp1cbNM_172707.319046
108.85143.775150.925138.475213.925
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016707
(v1.0)
A_51_P342716Ppp1cbNM_17270719046
11P0.5810.116P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016707
(v1.0)
Ppp1cb19046
604704