DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016774
GenePpp4r1
SynonymsPp4r1
Desc.protein phosphatase 4, regulatory subunit 1
LocusNM_146081 chr17:66132695-66191266(+)
NM_001114131 chr17:66132695-66191266(+)
DB links


Entrez 70351
MGI 1917601
Ensembl ENSMUSG00000061950
Vega OTTMUSG00000034201
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017267
(v2.0)
Ppp4r1NM_001114131,NM_146081,NR_10446570351
24.5996.807999.996535.470056.090579.8069433.41399.025776.22459.9309
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016774
(v1.0)
Ppp4r170351
1-Cell Transient0.99313
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017267
(v2.0)
Ppp4r170351
844/4330.4492603/4330.3609975/4334.73373439/4334.312950/433-1.0418390/433-0.748
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017267
(v2.0)
Ppp4r170351
442/1451.0899314/1450.9936618/1455.5791867/1454.99388/145-1.993121/145-0.8524
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017267
(v2.0)
Ppp4r170351
71.345616144.31
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017267
(v2.0)
Ppp4r170351
14.25528317.17
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016774
(v1.0)
Ppp4r1NM_001114131,NM_14608170351
7.075086.887754.072154.23223.6765
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016774
(v1.0)
Ppp4r1NM_001114131,NM_14608170351
60.529551.812526.432932.3286168.311
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016774
(v1.0)
Ppp4r1NM_001114131,NM_14608170351
7.397648.996117.51469
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016774
(v1.0)
Ppp4r1NM_001114131,NM_14608170351
7.220836.818596.69239
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016774
(v1.0)
Ppp4r1NM_001114131,NM_14608170351
96.787776.8336
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016774
(v1.0)
Ppp4r1NM_001114131,NM_14608170351
7.401948.87297.33998
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016774
(v1.0)
Ppp4r1NM_001114131,NM_14608170351
3.770184.086164.30863
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016774
(v1.0)
Ppp4r1NM_001114131,NM_14608170351
41.3799142.113
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016774
(v1.0)
Ppp4r1NM_001114131,NM_14608170351
3.458320.229821
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016774
(v1.0)
Ppp4r1NM_001114131,NM_14608170351
6.957557.26994
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016774
(v1.0)
6286H3022D11-3Ppp4r170351
U018173NAP097940-001Ppp4r1;TC911652,TC820187Q9CXV4U,F,23.39483.39313.51893.29463.24193.47523.5613
0016774
(v1.0)
15664K0221B08-3Mm.222150Ppp4r170351
U042924NAP036325-1Ppp4r1;U3.52863.57463.77773.5543.4743.63913.4961
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016774
(v1.0)
1424294_atMm.48686Ppp4r1NM_146081.2,NM_001114131.170351
121.375133.675111173.2588.375
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016774
(v1.0)
A_51_P163867Ppp4r1NM_14608170351
11P0.9430.664P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016774
(v1.0)
Ppp4r170351
470590