DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016827
GenePrdx1
Synonymsmacrophage 23kDa stress protein
macrophase stress protein 22kDa
MSP23
OSF-3
osteoblast specific factor 3
PAG
Paga
Prx I
prx1
PrxI
Tdpx2
TDX2
thioredoxin dependent peroxide reductase 2
Trx dependent peroxide reductase 2
Desc.peroxiredoxin 1
LocusNM_011034 chr4:116358204-116372605(+)
DB links


Entrez 18477
MGI 99523
Ensembl ENSMUSG00000028691
Vega OTTMUSG00000009533
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017320
(v2.0)
Prdx1NM_01103418477
319.071273.632427.38948.1487123.588494.894329.572221.102148.788653.093
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016827
(v1.0)
Prdx118477
Minor ZGA0.93508
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017320
(v2.0)
Prdx118477
607/3530.2685395/3530.0459128/3532.1280/3530.991936/353-1.2132199/353-1.4194
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017320
(v2.0)
Prdx118477
337/1690.4805189/1690.0449120/1693.019268/1691.980516/169-1.290788/169-1.5247
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017320
(v2.0)
Prdx118477
45.810612038.18
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017320
(v2.0)
Prdx118477
15.92468718.3
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016827
(v1.0)
Prdx1NM_01103418477
284.399295.335.834785.7627234.329
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016827
(v1.0)
Prdx1NM_01103418477
126.023148.2625.385940.1215102.48
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016827
(v1.0)
Prdx1NM_01103418477
297.365116.687322.179
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016827
(v1.0)
Prdx1NM_01103418477
290.258292.335163.92
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016827
(v1.0)
Prdx1NM_01103418477
150.03695.0555
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016827
(v1.0)
Prdx1NM_01103418477
297.538115.089179.782
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016827
(v1.0)
Prdx1NM_01103418477
33.177482.8074103.395
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016827
(v1.0)
Prdx1NM_01103418477
36.401343.8569
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016827
(v1.0)
Prdx1NM_01103418477
65.062161.9576
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016827
(v1.0)
Prdx1NM_01103418477
420.316484.359
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016827
(v1.0)
1416000_a_atMm.30929Prdx118477
3655.45762.81267.675944.63364.75
0016827
(v1.0)
1433866_x_atMm.30929Prdx118477
1670.32394.2751002.251037.51317.725
0016827
(v1.0)
1434731_x_atMm.30929Prdx118477
3799.47057.552330.97522864466
0016827
(v1.0)
1436691_x_atMm.30929Prdx118477
5765.258997.3753336.23675.7755397.35
0016827
(v1.0)
1437014_x_atMm.30929Prdx118477
591.55778.825361.775354.15451.525
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016827
(v1.0)
A_51_P353183Prdx1NM_01103418477
11P1.6070.132P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016827
(v1.0)
Prdx118477
313126265384155