DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016834
GenePreb
Synonyms
Desc.prolactin regulatory element binding
LocusNM_016703 chr5:31254040-31262734(-)
DB links


Entrez 50907
MGI 1355326
Ensembl ENSMUSG00000045302
Vega OTTMUSG00000022374
Featureprotein-coding
GO(BP)
GO(MF)
  •   3 Terms
      RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription (GO:0001077)
      DNA binding (GO:0003677)
      sequence-specific DNA binding transcription factor activity (GO:0003700)
GO(CC)
KEGG
  •   1 Terms
      Protein processing in endoplasmic reticulum (mmu04141)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017327
(v2.0)
PrebNM_01670350907
14.04518.225338.5294511.26748.3520711.81514.256210.48457.9730312.6478
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016834
(v1.0)
Preb50907
2-Cell Transient0.98121
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017327
(v2.0)
Preb50907
600/488-0.2143380/488-0.4759101/4881.3073288/4880.568148/488-1.2705326/488-1.1776
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017327
(v2.0)
Preb50907
284/214-0.104165/214-0.488687/2142.2395243/2141.503710/214-2.25263/214-2.336
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017327
(v2.0)
Preb50907
65.912513947.42
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017327
(v2.0)
Preb50907
28.36069928.65
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016834
(v1.0)
PrebNM_01670350907
8.553465.927338.379765.7893610.0805
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016834
(v1.0)
PrebNM_01670350907
60.97151.211142.326645.362493.6648
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016834
(v1.0)
PrebNM_01670350907
8.943425.136416.46685
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016834
(v1.0)
PrebNM_01670350907
8.729675.867817.78548
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016834
(v1.0)
PrebNM_01670350907
44.289854.9145
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016834
(v1.0)
PrebNM_01670350907
8.948625.066058.53886
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016834
(v1.0)
PrebNM_01670350907
7.758355.589865.52742
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016834
(v1.0)
PrebNM_01670350907
52.566850.8814
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016834
(v1.0)
PrebNM_01670350907
2.955112.8479
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016834
(v1.0)
PrebNM_01670350907
4.716271.55415
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016834
(v1.0)
1416502_a_atMm.272414PrebNM_016703.250907
278.125278.625231.125287.6371.425
0016834
(v1.0)
1456037_x_atMm.272414PrebNM_016703.250907
521.5404.075297.625344.475469.6
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016834
(v1.0)
A_51_P185794PrebNM_01670350907
11P0.9580.742P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016834
(v1.0)
Preb50907
11.331.3313.332