DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016869
GenePrkcd
SynonymsD14Ertd420e
PKC[d]
Pkcd
PKCdelta
Desc.protein kinase C, delta
LocusNM_011103 chr14:31408540-31439394(-)
DB links


Entrez 18753
MGI 97598
Ensembl ENSMUSG00000021948
Vega OTTMUSG00000025129
Featureprotein-coding
GO(BP)
  •   37 Terms
      protein phosphorylation (GO:0006468)
      apoptotic process (GO:0006915)
      induction of apoptosis (GO:0006917)
      response to oxidative stress (GO:0006979)
      cell cycle (GO:0007049)
      aspartate transport (GO:0015810)
      immunoglobulin mediated immune response (GO:0016064)
      phosphorylation (GO:0016310)
      peptidyl-threonine phosphorylation (GO:0018107)
      termination of signal transduction (GO:0023021)
      negative regulation of actin filament polymerization (GO:0030837)
      interleukin-10 production (GO:0032613)
      interleukin-12 production (GO:0032615)
      positive regulation of superoxide anion generation (GO:0032930)
      collagen metabolic process (GO:0032963)
      negative regulation of glial cell apoptotic process (GO:0034351)
      positive regulation of protein dephosphorylation (GO:0035307)
      intracellular signal transduction (GO:0035556)
      B cell proliferation (GO:0042100)
      neutrophil activation (GO:0042119)
      defense response to bacterium (GO:0042742)
      positive regulation of apoptotic process (GO:0043065)
      positive regulation of MAP kinase activity (GO:0043406)
      negative regulation of MAP kinase activity (GO:0043407)
      positive regulation of MAPK cascade (GO:0043410)
      positive regulation of glucose import (GO:0046326)
      negative regulation of insulin receptor signaling pathway (GO:0046627)
      protein autophosphorylation (GO:0046777)
      negative regulation of peptidyl-tyrosine phosphorylation (GO:0050732)
      negative regulation of filopodium assembly (GO:0051490)
      negative regulation of platelet aggregation (GO:0090331)
      cellular senescence (GO:0090398)
      positive regulation of phospholipid scramblase activity (GO:1900163)
      positive regulation of ceramide biosynthetic process (GO:2000304)
      positive regulation of glucosylceramide catabolic process (GO:2000753)
      positive regulation of sphingomyelin catabolic process (GO:2000755)
      positive regulation of response to DNA damage stimulus (GO:2001022)
GO(MF)
GO(CC)
KEGG
  •   8 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017364
(v2.0)
PrkcdNM_01110318753
95.5747.025777.8304380.144553.57576.319920.228110.389458.21256.16401
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016869
(v1.0)
Prkcd18753
2-Cell Transient0.96015
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017364
(v2.0)
Prkcd18753
925/5950.1235526/595-0.2935417/5953.06261066/5952.1678171/5950.25721010/5950.1638
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017364
(v2.0)
Prkcd18753
500/2230.6497275/2230.1854350/2234.1791882/2233.3005153/2231.497837/2231.305
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017364
(v2.0)
Prkcd18753
82.08215851.95
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017364
(v2.0)
Prkcd18753
18.24089219.83
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016869
(v1.0)
PrkcdNM_01110318753
7.304065.4276759.651637.119314.2479
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016869
(v1.0)
PrkcdNM_01110318753
60.346644.9204864.172369.52895.6614
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016869
(v1.0)
PrkcdNM_01110318753
7.6370734.95245.9217
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016869
(v1.0)
PrkcdNM_01110318753
7.454535.373177.71261
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016869
(v1.0)
PrkcdNM_01110318753
88.276595.8195
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016869
(v1.0)
PrkcdNM_01110318753
7.6415134.47368.45893
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016869
(v1.0)
PrkcdNM_01110318753
55.228135.840240.2874
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016869
(v1.0)
PrkcdNM_01110318753
280.485253.118
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016869
(v1.0)
PrkcdNM_01110318753
10.284951.8468
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016869
(v1.0)
PrkcdNM_01110318753
0.1627940.314989
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016869
(v1.0)
8048H3059B03-3Mm.2314Prkcd18753
U035358NAP009113-001Prkcd;TC854138,TC854135,TC854133P28867U,F,23.04823.07863.29223.5532.92962.87942.8779
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016869
(v1.0)
1422847_a_atMm.2314PrkcdNM_011103.318753
199.625135.375410.5268.25121.475
0016869
(v1.0)
1442256_atMm.2314PrkcdNM_011103.318753
0219.5313.55295.7750
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0016869
(v1.0)
Prkcd18753
320320