DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0016988
GenePrr3
SynonymsCAT56
Desc.proline-rich polypeptide 3
LocusNR_028507 chr17:36109484-36116770(-)
NM_145487 chr17:36109484-36116412(-)
NR_028516 chr17:36109484-36115968(-)
NM_001165892 chr17:36114701-36116412(-)
DB links


Entrez 75210
MGI 1922460
Ensembl ENSMUSG00000038500
Vega OTTMUSG00000037219
Featureprotein-coding
GO(BP)
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017486
(v2.0)
Prr3NM_001165892,NM_001282012,NM_001282013,NM_001282024,NM_001282025,NM_14548775210
9.84644.383718.3195115.20578.7779211.40088.6095712.75496.2970911.7147
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0016988
(v1.0)
Prr375210
2-Cell Transient0.92203
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017486
(v2.0)
Prr375210
902/5030.3292527/503-0.0489727/5034.10011858/5033.2119/503-2.6066164/503-2.2058
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017486
(v2.0)
Prr375210
495/1880.8804265/1880.3773655/1885.31381506/1884.3158/188-2.358580/188-1.8126
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017486
(v2.0)
Prr375210
99.66620847.92
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017486
(v2.0)
Prr375210
12.768811411.2
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016988
(v1.0)
Prr3NM_001165892,NM_14548775210
4.857286.822711.68376.83076.18157
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0016988
(v1.0)
Prr3NM_001165892,NM_145487,NR_028507,NR_02851675210
5.405810.41217.030228.063125.6873
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0016988
(v1.0)
Prr3NM_001165892,NM_14548775210
5.078733.76367.44371
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0016988
(v1.0)
Prr3NM_001165892,NM_14548775210
4.957346.754199.95
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0016988
(v1.0)
Prr3NM_001165892,NM_145487,NR_028507,NR_02851675210
39.68836.4573
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0016988
(v1.0)
Prr3NM_001165892,NM_14548775210
5.081683.7120510.9128
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0016988
(v1.0)
Prr3NM_001165892,NM_14548775210
10.81736.595314.49262
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0016988
(v1.0)
Prr3NM_001165892,NM_145487,NR_028507,NR_02851675210
31.122924.1087
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0016988
(v1.0)
Prr3NM_001165892,NM_14548775210
1.851549.06463
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0016988
(v1.0)
Prr3NM_001165892,NM_14548775210
5.777766.3035
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0016988
(v1.0)
19533L0278A02-3Mm.400364930540G07Rik75210
U037765NAP012842-0014930540G07Rik;TC820803Q91YI5U,F,23.69723.4943.4063.54393.5963.46083.4704
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0016988
(v1.0)
1424145_atMm.40036Prr3NM_145487.3,NM_001165892.175210
057.07574.575066.825
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0016988
(v1.0)
A_51_P498340Prr3NM_14548775210
11P1.1780.369P
Proteome N/A