DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017121
GenePsme4
Synonyms
Desc.proteasome (prosome, macropain) activator subunit 4
LocusNM_134013 chr11:30671775-30780361(+)
DB links


Entrez 103554
MGI 2143994
Ensembl ENSMUSG00000040850
Vega OTTMUSG00000005356
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017623
(v2.0)
Psme4NM_134013103554
29.34975.2502147.206125.57456.603416.688838.253196.11457.358319.4826
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017121
(v1.0)
Psme4103554
Minor ZGA0.96594
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017623
(v2.0)
Psme4103554
620/3020.5234475/3020.5357225/3023.126640/3022.4051127/3020.7996536/3020.2276
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017623
(v2.0)
Psme4103554
353/1280.9453248/1280.8331213/1284.2119584/1283.495533/1280.0991225/1280.2129
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017623
(v2.0)
Psme4103554
23.765510522.63
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017623
(v2.0)
Psme4103554
5.6369866.55
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017121
(v1.0)
Psme4NM_134013103554
78.2051101.6393.470739.2326.9894
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017121
(v1.0)
Psme4FR094080,FR393851,NM_134013103554
481.388568.335475.682224.572135.642
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017121
(v1.0)
Psme4NM_134013103554
81.770610.7332110.88
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017121
(v1.0)
Psme4NM_134013103554
79.8162100.60970.9833
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017121
(v1.0)
Psme4FR094080,FR393851,NM_134013103554
2327.161910.46
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017121
(v1.0)
Psme4NM_134013103554
81.818210.586277.8521
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017121
(v1.0)
Psme4NM_134013103554
86.539337.878139.6934
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017121
(v1.0)
Psme4FR094080,FR393851,NM_134013103554
309.509317.699
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017121
(v1.0)
Psme4NM_134013103554
49.073292.3425
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017121
(v1.0)
Psme4NM_134013103554
23.341128.3466
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017121
(v1.0)
11637H3120D03-3Mm.21963AA409398103554
U043153NAP006567-001Temo;TC858542Q99KM2U,F,23.90533.86113.2133.25923.06353.06123.1488
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017121
(v1.0)
1452211_atMm.240066Psme4NM_134013.3103554
570.9751084.4251509.4120.7413.575
0017121
(v1.0)
1445147_atMm.240066Psme4NM_134013.3103554
000108.725139.775
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017121
(v1.0)
A_51_P166198Psme4BC004575103554
11P1.3270.216P
0017121
(v1.0)
A_52_P111438Psme4NM_134013103554
11P1.0250.921P
0017121
(v1.0)
A_52_P344897Psme4NM_134013103554
11P1.0590.673P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017121
(v1.0)
Psme4103554
4284213