DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017242
GenePuf60
Synonyms
Desc.poly-U binding splicing factor 60
LocusNM_001164600 chr15:75900612-75911300(-)
NM_133691 chr15:75900612-75911376(-)
NM_028364 chr15:75900612-75911376(-)
DB links


Entrez 67959
MGI 1915209
Ensembl ENSMUSG00000002524
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017749
(v2.0)
Puf60NM_001164600,NM_028364,NM_13369167959
55.114893.070713.1927111.822143.985105.032134.42617.4914136.161125.62
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017242
(v1.0)
Puf6067959
Major ZGA0.7614
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017749
(v2.0)
Puf6067959
699/511-0.0607423/511-0.388179/5112.0619385/5110.919576/511-0.6843462/511-0.7429
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017749
(v2.0)
Puf6067959
336/2070.1852182/207-0.3003168/2073.2263349/2072.071611/207-2.079553/207-2.5312
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017749
(v2.0)
Puf6067959
55.201314637.81
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017749
(v2.0)
Puf6067959
20.365810619.21
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017242
(v1.0)
Puf60NM_001164600,NM_028364,NM_13369167959
96.74249.1539883.2585100.02295.3869
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017242
(v1.0)
Puf60FR220585,NM_001164600,NM_028364,NM_13369167959
1042.3892.3028759.715915.206900.291
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017242
(v1.0)
Puf60NM_001164600,NM_028364,NM_13369167959
101.15320.15859.98719
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017242
(v1.0)
Puf60NM_001164600,NM_028364,NM_13369167959
98.73549.0620612.9997
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017242
(v1.0)
Puf60FR220585,NM_001164600,NM_028364,NM_13369167959
105.465118.986
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017242
(v1.0)
Puf60NM_001164600,NM_028364,NM_13369167959
101.21219.882314.2577
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017242
(v1.0)
Puf60NM_001164600,NM_028364,NM_13369167959
77.084496.575194.2018
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017242
(v1.0)
Puf60FR220585,NM_001164600,NM_028364,NM_13369167959
414.082410.213
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017242
(v1.0)
Puf60NM_001164600,NM_028364,NM_13369167959
30.716948.796
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017242
(v1.0)
Puf60NM_001164600,NM_028364,NM_13369167959
1.027351.42461
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017242
(v1.0)
5602H3003G02-3Mm.299652410104I19Rik67959
U036325NAP097411-0012410104I19Rik;TC798760Q91VR6U,F,22.6912.9583.09913.28312.69312.99132.7348
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017242
(v1.0)
1416438_atMm.29965Puf60NM_028364.2,NM_133691.5,NM_001164600.167959
492.4750177.25246.2223.825
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017242
(v1.0)
A_51_P1775832410104I19RikNM_13369167959
11P0.5320.118P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017242
(v1.0)
Puf6067959
4.67407.3380