DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017251
GenePus7
Synonyms
Desc.pseudouridylate synthase 7 homolog (S. cerevisiae)
LocusNM_178403 chr5:23246514-23289479(-)
DB links


Entrez 78697
MGI 1925947
Ensembl ENSMUSG00000057541
Vega OTTMUSG00000028491
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017758
(v2.0)
Pus7NM_001289780,NM_001289781,NM_17840378697
2.434319.3544912.182431.779622.5095.5652312.353312.174918.43595.83192
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017251
(v1.0)
Pus778697
2-Cell Transient0.96822
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017758
(v2.0)
Pus778697
745/4550.1981472/455-0.0631162/4552.0821471/4551.3762134/4550.2917615/455-0.1642
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017758
(v2.0)
Pus778697
359/1860.4339243/1860.2681102/1862.6572343/1862.199105/1861.2146483/1860.7742
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017758
(v2.0)
Pus778697
58.069616934.36
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017758
(v2.0)
Pus778697
22.26698925.02
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017251
(v1.0)
Pus7NM_17840378697
11.51759.9822127.576718.214110.0584
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017251
(v1.0)
Pus7FR176465,NM_17840378697
201.048133.882512.237341.763195.194
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017251
(v1.0)
Pus7NM_17840378697
12.04261.0567810.8908
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017251
(v1.0)
Pus7NM_17840378697
11.75479.8819810.6857
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017251
(v1.0)
Pus7NM_17840378697
166.687197.72
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017251
(v1.0)
Pus7NM_17840378697
12.04961.042311.7197
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017251
(v1.0)
Pus7NM_17840378697
25.531717.586414.9002
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017251
(v1.0)
Pus7FR176465,NM_17840378697
40.363835.5406
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017251
(v1.0)
Pus7NM_17840378697
4.7955.35859
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017251
(v1.0)
Pus7NM_17840378697
3.943224.99084
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017251
(v1.0)
2917C0453G07-3Mm.58660C330017I15Rik78697
U025983NAP099947-001C330017I15Rik;TC931301Q91VU7U,F3.72923.77963.38963.61362.91453.35423.1887
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017251
(v1.0)
1426631_atMm.58660Pus7NM_178403.478697
136.925163.25150.05143.175152.8
Agilent44K N/A
Proteome N/A