DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017319
GeneRab12
Synonyms
Desc.RAB12, member RAS oncogene family
LocusNM_024448 chr17:66843852-66869010(-)
DB links


Entrez 19328
MGI 894284
Ensembl ENSMUSG00000023460
Vega OTTMUSG00000021023
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017832
(v2.0)
Rab12NM_02444819328
16.003122.414744.92426.715212.649912.796830.249243.798214.004912.079
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017319
(v1.0)
Rab1219328
Minor ZGA0.99908
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017832
(v2.0)
Rab1219328
810/4630.2935504/4630.0062151/4631.9568490/4631.4082265/4631.24531431/4631.027
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017832
(v2.0)
Rab1219328
455/1860.7745232/1860.2016117/1862.8534351/1862.2322154/1861.7628811/1861.52
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017832
(v2.0)
Rab1219328
72.668716444.31
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017832
(v2.0)
Rab1219328
16.086110515.32
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017319
(v1.0)
Rab12NM_02444819328
23.294431.053219.8988.7473521.3126
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017319
(v1.0)
Rab12FR159794,NM_02444819328
30.181834.753729.832818.913835.3547
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017319
(v1.0)
Rab12NM_02444819328
24.35645.8524933.8797
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017319
(v1.0)
Rab12NM_02444819328
23.774330.741432.3912
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017319
(v1.0)
Rab12FR159794,NM_02444819328
289.301220.828
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017319
(v1.0)
Rab12NM_02444819328
24.37065.7723335.5256
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017319
(v1.0)
Rab12NM_02444819328
18.42248.445919.69897
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017319
(v1.0)
Rab12FR159794,NM_02444819328
90.7832120.975
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017319
(v1.0)
Rab12NM_02444819328
7.946595.99939
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017319
(v1.0)
Rab12NM_02444819328
14.248913.9868
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017319
(v1.0)
3487C0669B08-3Mm.153054U038018NAP100575-001Rab12;TC9061382.3652.2771.91462.5232.34072.49292.6493
0017319
(v1.0)
12430H3143E11-3Mm.21759Rab1219328
U038017NAP008821-001Rab12;TC870230P35283U,F,23.92333.92213.47013.38043.39173.37693.5512
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017319
(v1.0)
1427992_a_atMm.248313Rab12NM_024448.219328
111.825219.225157.1094.975
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017319
(v1.0)
A_51_P296027Rab12NM_02444819328
11P0.6410.161P
0017319
(v1.0)
A_51_P507111Rab12AK08108419328
11P0.01250.0147P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017319
(v1.0)
Rab1219328
110110