DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017358
GeneRab3ip
SynonymsGtpat12
Rabin3
SSX2 interacting protein
Desc.RAB3A interacting protein
LocusNM_001003950 chr10:116342840-116387436(-)
DB links


Entrez 216363
MGI 105933
Ensembl ENSMUSG00000064181
Featureprotein-coding
GO(BP)
GO(MF)
  •   3 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017873
(v2.0)
Rab3ipNM_001003950216363
22.45455.896416.2477215.807611.69677.847992.183727.4406911.93648.92734
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017358
(v1.0)
Rab3ip216363
2-Cell Transient0.95825
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017873
(v2.0)
Rab3ip216363
647/495-0.1262440/495-0.2855123/4951.569230/4950.224450/495-1.2332304/495-1.2984
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017873
(v2.0)
Rab3ip216363
295/1980.0621187/198-0.1976112/1982.7061199/1981.327619/198-1.2797140/198-1.0912
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017873
(v2.0)
Rab3ip216363
98.324615563.44
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017873
(v2.0)
Rab3ip216363
22.79477430.8
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017358
(v1.0)
Rab3ipNM_001003950216363
6.12894.3270411.75098.085051.53622
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017358
(v1.0)
Rab3ipNM_001003950216363
49.4727143.569132.45681.38474.47648
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017358
(v1.0)
Rab3ipNM_001003950216363
6.408338.211844.7209
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017358
(v1.0)
Rab3ipNM_001003950216363
6.255164.28365.51946
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017358
(v1.0)
Rab3ipNM_001003950216363
183.38945.3745
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017358
(v1.0)
Rab3ipNM_001003950216363
6.412058.099376.05356
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017358
(v1.0)
Rab3ipNM_001003950216363
10.87957.806448.22882
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017358
(v1.0)
Rab3ipNM_001003950216363
59.575461.9136
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017358
(v1.0)
Rab3ipNM_001003950216363
10.20559.17708
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017358
(v1.0)
Rab3ipNM_001003950216363
1.178490.998973
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017358
(v1.0)
3560C0816A09-3Mm.27668Gtpat12216363
U032247NAP097924-001Gtpat12;TC831743Q64154U,F,22.94913.09463.25423.66183.30433.57763.468
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017358
(v1.0)
1434306_atMm.336394Rab3ipNM_001003950.2216363
113.255.45214.125117.9228.05
0017358
(v1.0)
1436103_atMm.336394Rab3ipNM_001003950.2216363
0000563.225
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017358
(v1.0)
A_52_P598259Rab3ipNM_001003950216363
11P0.8030.465P
Proteome N/A