DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017378
GeneRabep1
Synonymsneurocrescin
RAB5 effector protein
rabaptin-5
Desc.rabaptin, RAB GTPase binding effector protein 1
LocusNM_019400 chr11:70658265-70756607(+)
DB links


Entrez 54189
MGI 1860236
Ensembl ENSMUSG00000020817
Vega OTTMUSG00000006080
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017892
(v2.0)
Rabep1NM_001291141,NM_001291142,NM_001291143,NM_01940054189
8.00916.292630.613942.774733.81017.4199926.343419.608330.54838.99349
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017378
(v1.0)
Rabep154189
2-Cell Transient0.88998
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017892
(v2.0)
Rabep154189
609/3630.2331430/3630.127895/3631.6348249/3630.783383/363-0.0702664/3630.2712
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017892
(v2.0)
Rabep154189
345/1820.4079223/1820.17690/1822.5079231/1821.661731/182-0.4826215/182-0.3567
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017892
(v2.0)
Rabep154189
43.928611338.87
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017892
(v2.0)
Rabep154189
9.01827611.87
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017378
(v1.0)
Rabep1NM_01940054189
16.793321.0131.43223.14118.4075
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017378
(v1.0)
Rabep1NM_01940054189
20.865823.449837.993728.786123.576
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017378
(v1.0)
Rabep1NM_01940054189
17.55892.8577222.9224
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017378
(v1.0)
Rabep1NM_01940054189
17.139220.799114.4201
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017378
(v1.0)
Rabep1NM_01940054189
94.175459.2607
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017378
(v1.0)
Rabep1NM_01940054189
17.56912.8185815.8155
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017378
(v1.0)
Rabep1NM_01940054189
29.101122.343521.0942
SOLiD_NMNR_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017378
(v1.0)
Rabep1NM_01940054189
5.8435913.7893
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017378
(v1.0)
Rabep1NM_01940054189
2.005542.27657
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017378
(v1.0)
5529H3002C04-3Mm.7087Rab5ep-pending54189
U043185NAP005193-002Rab5ep;TC826201O35551U,F,22.83352.80822.91513.2952.84532.85142.9751
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017378
(v1.0)
1426023_a_atMm.7087Rabep1NM_019400.254189
45.9553.97575.075016.025
0017378
(v1.0)
1421305_x_atMm.7087Rabep1NM_019400.254189
87.550128.8048.125
0017378
(v1.0)
1427448_atMm.7087Rabep1NM_019400.254189
38.57530.025108.2588.5554.7
0017378
(v1.0)
1443856_atMm.7087Rabep1NM_019400.254189
39.175069.225104.35115.7
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017378
(v1.0)
A_51_P242021Rabep1NM_01940054189
11P1.0810.582P
Proteome N/A