DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017381
GeneRabgap1
SynonymsGapcena
Desc.RAB GTPase activating protein 1
LocusNM_146121 chr2:37298805-37421957(+)
NM_001033960 chr2:37307774-37400482(+)
DB links


Entrez 227800
MGI 2385139
Ensembl ENSMUSG00000035437
Vega OTTMUSG00000012651
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017895
(v2.0)
Rabgap1NM_001033960,NM_146121227800
10.111214.788724.465327.281126.20178.2673520.336821.098722.7388.86554
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017381
(v1.0)
Rabgap1227800
MGA0.96007
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017895
(v2.0)
Rabgap1227800
575/3010.4198454/3010.4754130/3012.3439343/3011.511935/301-1.0257175/301-1.3741
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017895
(v2.0)
Rabgap1227800
315/1370.6844212/1370.5106126/1373.3693331/1372.58216/137-0.99695/137-1.1152
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017895
(v2.0)
Rabgap1227800
34.19269037.99
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017895
(v2.0)
Rabgap1227800
16.46297123.19
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017381
(v1.0)
Rabgap1NM_001033960,NM_146121227800
15.356216.962120.332118.174114.1775
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017381
(v1.0)
Rabgap1NM_001033960,NM_146121227800
57.812471.3728105.94490.969671.4327
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017381
(v1.0)
Rabgap1NM_001033960,NM_146121227800
16.05643.6977618.506
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017381
(v1.0)
Rabgap1NM_001033960,NM_146121227800
15.672616.791815.645
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017381
(v1.0)
Rabgap1NM_001033960,NM_146121227800
224.582161.602
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017381
(v1.0)
Rabgap1NM_001033960,NM_146121227800
16.06573.6471117.1589
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017381
(v1.0)
Rabgap1NM_001033960,NM_146121227800
18.824317.547815.7018
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017381
(v1.0)
Rabgap1NM_001033960,NM_146121227800
102.494104.258
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017381
(v1.0)
Rabgap1NM_001033960,NM_146121227800
8.2279115.2565
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017381
(v1.0)
Rabgap1NM_001033960,NM_146121227800
2.412870.986172
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017381
(v1.0)
Rabgap1227800
001001