DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017398
GeneRad21
SynonymsSCC1
Desc.RAD21 homolog (S. pombe)
LocusNM_009009 chr15:51794150-51823306(-)
DB links


Entrez 19357
MGI 108016
Ensembl ENSMUSG00000022314
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017911
(v2.0)
Rad21NM_00900919357
21.751142.755887.162229.808261.76689.737192.145464.0611187.40876.483
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017398
(v1.0)
Rad2119357
Major ZGA0.98523
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017911
(v2.0)
Rad2119357
728/2970.7786540/2970.7443454/2974.15872011/2974.079262/297-0.1993306/297-0.554
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017911
(v2.0)
Rad2119357
375/1041.3292263/1041.2144372/1045.28441315/1044.958310/104-1.239971/104-1.1334
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017911
(v2.0)
Rad2119357
39.679212033.07
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017911
(v2.0)
Rad2119357
9.68818711.14
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017398
(v1.0)
Rad21NM_00900919357
44.441960.3092171.062181.51164.7251
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017398
(v1.0)
Rad21FR144394,NM_00900919357
61.717992.2442289.823363.56989.587
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017398
(v1.0)
Rad21NM_00900919357
46.46817.9545965.7986
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017398
(v1.0)
Rad21NM_00900919357
45.357559.703647.4111
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017398
(v1.0)
Rad21NM_00900919357
444.077408.821
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017398
(v1.0)
Rad21NM_00900919357
46.49517.8456451.9989
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017398
(v1.0)
Rad21NM_00900919357
158.376175.256129.603
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017398
(v1.0)
Rad21FR144394,NM_00900919357
379.495267.821
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017398
(v1.0)
Rad21NM_00900919357
61.9206106.927
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017398
(v1.0)
Rad21NM_00900919357
29.478554.7913
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017398
(v1.0)
10842H3104D01-3Mm.182628Rad2119357
U036166NAP101428-1Rad21;TC940630,TC940628Q61550U,F,24.25514.2694.02484.50594.04024.20344.1881
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017398
(v1.0)
1416161_atMm.182628Rad21NM_009009.419357
249.375578.951315.51618.525859.525
0017398
(v1.0)
1455938_x_atMm.182628Rad21NM_009009.419357
140.15203.85449.1578.225213.7
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017398
(v1.0)
A_51_P384091Rad21NM_00900919357
11P0.8530.357P
Proteome N/A