DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017402
GeneRad50
SynonymsMrell
Rad50l
Desc.RAD50 homolog (S. cerevisiae)
LocusNM_009012 chr11:53463021-53520821(-)
DB links


Entrez 19360
MGI 109292
Ensembl ENSMUSG00000020380
Vega OTTMUSG00000005644
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   2 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017915
(v2.0)
Rad50NM_00901219360
3.8078916.654116.07510.99635.856787.660838.2783416.50647.553737.3906
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017402
(v1.0)
Rad5019360
Maternal RNA0.94246
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017915
(v2.0)
Rad5019360
566/3790.0656404/379-0.024104/3791.7038314/3791.054954/379-0.7427315/379-0.8631
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017915
(v2.0)
Rad5019360
302/1790.2405214/1790.1407102/1792.7091306/1792.089419/179-1.1373114/179-1.2393
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017915
(v2.0)
Rad5019360
65.96413847.8
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017915
(v2.0)
Rad5019360
14.5018317.47
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017402
(v1.0)
Rad50NM_00901219360
17.30611.08878.175074.046335.71348
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017402
(v1.0)
Rad50NM_00901219360
112.63763.473433.469121.187530.3161
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017402
(v1.0)
Rad50NM_00901219360
18.0951.3925812.098
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017402
(v1.0)
Rad50NM_00901219360
17.662510.977312.2164
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017402
(v1.0)
Rad50NM_00901219360
86.6574109.103
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017402
(v1.0)
Rad50NM_00901219360
18.10551.3735113.3985
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017402
(v1.0)
Rad50NM_00901219360
7.568843.906895.25649
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017402
(v1.0)
Rad50NM_00901219360
27.252249.4853
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017402
(v1.0)
Rad50NM_00901219360
52.320420.0846
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017402
(v1.0)
Rad50NM_00901219360
9.5805813.1931
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017402
(v1.0)
19648L0287F04-3Mm.4888Rad5019360
U032768NAP002231-001Rad50;TC820908,TC820907P70388U,F,22.93582.82692.56512.03832.51692.56522.4752
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017402
(v1.0)
1422630_atMm.4888Rad50NM_009012.219360
399.9219.4318.2750183.025
Agilent44K N/A
Proteome N/A