DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017409
GeneRad52
Synonyms
Desc.RAD52 homolog (S. cerevisiae)
LocusNM_001166382 chr6:119852716-119872841(+)
NM_001166381 chr6:119852716-119872841(+)
NM_001166383 chr6:119852716-119871326(+)
NM_011236 chr6:119852716-119872841(+)
DB links


Entrez 19365
MGI 101949
Ensembl ENSMUSG00000030166
Vega OTTMUSG00000023589
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2017922
(v2.0)
Rad52NM_001166381,NM_001166382,NM_001166383,NM_01123619365
2.6729221.984735.03735.6385810.61673.676728.3843637.412213.34034.15944
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017409
(v1.0)
Rad5219365
Minor ZGA0.95776
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017922
(v2.0)
Rad5219365
726/4380.2158479/4380.0129132/4381.8421335/4380.940561/438-0.7765461/438-0.5241
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2017922
(v2.0)
Rad5219365
369/1550.7348213/1550.3404123/1553.1704308/1552.303418/155-1.0087150/155-0.6414
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017922
(v2.0)
Rad5219365
64.344914444.68
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2017922
(v2.0)
Rad5219365
18.19619519.15
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017409
(v1.0)
Rad52NM_001166381,NM_001166382,NM_001166383,NM_01123619365
22.853724.28284.196927.387195.90251
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017409
(v1.0)
Rad52NM_001166381,NM_001166382,NM_001166383,NM_01123619365
32.459429.30827.500114.369514.9433
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017409
(v1.0)
Rad52NM_001166381,NM_001166382,NM_001166383,NM_01123619365
23.89570.97761226.493
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017409
(v1.0)
Rad52NM_001166381,NM_001166382,NM_001166383,NM_01123619365
23.324624.038927.7345
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017409
(v1.0)
Rad52NM_001166381,NM_001166382,NM_001166383,NM_01123619365
214.767251.355
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017409
(v1.0)
Rad52NM_001166381,NM_001166382,NM_001166383,NM_01123619365
23.90960.96422230.4183
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017409
(v1.0)
Rad52NM_001166381,NM_001166382,NM_001166383,NM_01123619365
3.88577.132629.24922
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017409
(v1.0)
Rad52NM_001166381,NM_001166382,NM_001166383,NM_01123619365
19.441317.1552
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017409
(v1.0)
Rad52NM_001166381,NM_001166382,NM_001166383,NM_01123619365
19.31699.40524
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017409
(v1.0)
Rad52NM_001166381,NM_001166382,NM_001166383,NM_01123619365
0.6312891.23596
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017409
(v1.0)
16075K0326G09-3Mm.149Rad5219365
U007332NAP098282-001Rad52;TC820791,TC820790P43352U,F,22.60762.71952.6582.66252.49382.72832.4068
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017409
(v1.0)
1416602_a_atMm.149Rad52NM_001166381.1,NM_001166382.1,NM_011236.2,NM_001166383.119365
54.563.935.1032.275
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017409
(v1.0)
A_51_P105017Rad52NM_01123619365
11P0.8570.61P
Proteome N/A