DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017466
GeneRapgef6
SynonymsPDZ-GEF2
Pdzgef2
RA-GEF-2
DescriptionRap guanine nucleotide exchange factor (GEF) 6
LocusNM_001252494 UCSC: chr11:54336347-54512788(+) OLP: chr11:54336347-54512788(+)
NM_001252496 UCSC: chr11:54336347-54512788(+) OLP: chr11:54336347-54512788(+)
NM_175258 UCSC: chr11:54336347-54512788(+) OLP: chr11:54336347-54512788(+)
NM_001252498 UCSC: chr11:54409648-54452366(+) OLP: chr11:54409648-54452366(+)
NM_001252497 UCSC: chr11:54409648-54462966(+) OLP: chr11:54409648-54462966(+)
DB links


Entrez 192786
MGI 2384761
Ensembl ENSMUSG00000037533
Vega OTTMUSG00000005672
Featureprotein-coding
GO_BP
GO_MF
GO_CC
KEGG
Ver2_FPKM see DBTMEE:2017979 (v2.0)
SPR_Histone_Erkek_5KaroundTSS N/A
SPR_Histone_Erkek_2KaroundTSS N/A
SPR_Methy_Kobayashi_5KaroundTSS N/A
SPR_Methy_Kobayashi_2KaroundTSS N/A
SOLiD_OocyteTo4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017466
(v1.0)
Rapgef6NM_175258192786
9.065529.3331813.38129.7913610.3256
SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017466
(v1.0)
Rapgef6NM_175258192786
9.478833.0600210.1827
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017466
(v1.0)
Rapgef6NM_175258192786
9.252289.239477.62486
SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017466
(v1.0)
Rapgef6NM_175258192786
9.484343.018118.36269
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017466
(v1.0)
Rapgef6NM_175258192786
12.38899.453949.70813
Illumina_Oo_2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017466
(v1.0)
Rapgef6NM_175258192786
4.44567.69891
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017466
(v1.0)
Rapgef6NM_175258192786
1.442061.549
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017466
(v1.0)
1427412_s_atMm.254404Rapgef6NM_175258.3192786
78.925091.67500
0017466
(v1.0)
1443877_a_atMm.254404Rapgef6NM_175258.3192786
180.075228.75142.45205172.9
0017466
(v1.0)
1434509_atMm.254404Rapgef6NM_175258.3192786
0688.425580.8500
Agilent44K
DBTMEEProbe_IDGeneAccEntrezOo1_xFoldOo1_pValOo1_FlagOo2_xFoldOo2_pValOo2_Flag
0017466
(v1.0)
A_51_P254757Rapgef6AK220459192786
11P1.860.106P
0017466
(v1.0)
A_51_P407209Rapgef6AK220459192786
11P0.03620.0348P
Proteome N/A