DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017518
GeneRb1cc1
SynonymsCc1
Fip200
LaXp180
Desc.RB1-inducible coiled-coil 1
LocusNM_009826 chr1:6204743-6266185(+)
DB links


Entrez 12421
MGI 1341850
Ensembl ENSMUSG00000025907
Vega OTTMUSG00000033467
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018031
(v2.0)
Rb1cc1NM_00982612421
8.2199735.606759.2575152.76274.5755.678724.41946.1778242.9244.92308
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017518
(v1.0)
Rb1cc112421
MGA0.97815
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018031
(v2.0)
Rb1cc112421
716/3750.4193530/3750.382245/3752.9469511/3751.770912/375-2.8084114/375-2.302
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018031
(v2.0)
Rb1cc112421
444/1820.7705292/1820.5633239/1823.907491/1822.74626/182-2.675374/182-1.8764
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018031
(v2.0)
Rb1cc112421
37.078311033.71
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018031
(v2.0)
Rb1cc112421
9.82578112.13
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017518
(v1.0)
Rb1cc1NM_00982612421
36.986840.9631113.692190.28817.0251
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017518
(v1.0)
Rb1cc1NM_00982612421
2521.223895.215412.375413.4585.9264
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017518
(v1.0)
Rb1cc1NM_00982612421
38.67313.0061344.6917
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017518
(v1.0)
Rb1cc1NM_00982612421
37.748740.551834.1767
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017518
(v1.0)
Rb1cc1NM_00982612421
330.8420.12
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017518
(v1.0)
Rb1cc1NM_00982612421
38.69552.9649537.4838
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017518
(v1.0)
Rb1cc1NM_00982612421
105.261183.731167.908
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017518
(v1.0)
Rb1cc1NM_00982612421
754.371664.557
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017518
(v1.0)
Rb1cc1NM_00982612421
27.4718188.894
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017518
(v1.0)
Rb1cc1NM_00982612421
9.3630822.3872
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017518
(v1.0)
3823C0902B02-3Mm.141567Rb1cc112421
U000013NAP092549-001Cc1;Rb1cc1;TC864165,TC821357Q61384U,F,23.17913.01452.60563.32612.65312.75152.5701
0017518
(v1.0)
9303H3079D07-3Mm.141567Rb1cc112421
U000013NAP092549-001Cc1;Rb1cc1;TC864165,TC821358,TC821357Q61384U,F,23.20053.33593.49463.77663.39723.39083.1582
0017518
(v1.0)
16241K0346D06-3Mm.141567Rb1cc112421
Rb1cc13.29913.02562.78983.45063.4673.42683.2516
0017518
(v1.0)
17317K0605G06-3Mm.141567Rb1cc112421
U000013NAP032808-1Cc1;Rb1cc1;TC864166Q61384U,F,23.30833.27663.18713.49023.45183.37663.2624
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017518
(v1.0)
1418968_atMm.293811Rb1cc1NM_009826.412421
206.475252.1720.275373.575116
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017518
(v1.0)
A_51_P332100Rb1cc1NM_00982612421
11P0.2410.0863P
0017518
(v1.0)
A_52_P347826Rb1cc1NM_00982612421
11P1.2430.274P
0017518
(v1.0)
A_52_P542172Rb1cc1NM_00982612421
11P0.770.233P
0017518
(v1.0)
A_52_P558601Rb1cc1NM_00982612421
11P0.2360.0585P
Proteome N/A