DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017521
GeneRbbp5
Synonyms
Desc.retinoblastoma binding protein 5
LocusNM_172517 chr1:134373944-134402242(+)
DB links


Entrez 213464
MGI 1918367
Ensembl ENSMUSG00000026439
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018035
(v2.0)
Rbbp5NM_172517213464
7.4453329.305440.004312.417419.176925.866510.448542.709318.049922.8713
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017521
(v1.0)
Rbbp5213464
Minor ZGA0.9344
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018035
(v2.0)
Rbbp5213464
577/421-0.0579455/421-0.0041152/4212.0998346/4211.043815/421-2.6741126/421-2.3259
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018035
(v2.0)
Rbbp5213464
243/1640.0541178/1640.002145/1643.3304333/1642.33554/164-3.01453/164-2.1971
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018035
(v2.0)
Rbbp5213464
47.866711641.26
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018035
(v2.0)
Rbbp5213464
14.83388118.31
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017521
(v1.0)
Rbbp5NM_172517213464
30.46227.6889.2386913.29447.37251
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017521
(v1.0)
Rbbp5NM_172517213464
527.02414.67995.0115187.01121.671
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017521
(v1.0)
Rbbp5NM_172517213464
31.85082.7228330.2082
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017521
(v1.0)
Rbbp5NM_172517213464
31.089527.4131.6357
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017521
(v1.0)
Rbbp5NM_172517213464
332.049431.748
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017521
(v1.0)
Rbbp5NM_172517213464
31.86932.6855434.6969
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017521
(v1.0)
Rbbp5NM_172517213464
8.5535912.836212.4796
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017521
(v1.0)
Rbbp5NM_172517213464
106.19753.1545
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017521
(v1.0)
Rbbp5NM_172517213464
27.18254.43279
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017521
(v1.0)
Rbbp5NM_172517213464
4.396124.22152
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017521
(v1.0)
7950H3056H10-3Mm.1328684933411J24Rik213464
U000803NAP092992-0014933411J24Rik;TC893830,TC860073U,F3.4763.55163.75313.49953.26263.37963.3001
0017521
(v1.0)
10433H3096C07-3Mm.1328684933411J24Rik213464
U000803NAP104795-14933411J24Rik;TC860076,TC860073U,F3.35923.44863.08283.46943.41823.48273.5261
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017521
(v1.0)
1428886_atMm.132868Rbbp5NM_172517.2213464
879.9788.425632.725639.325883.55
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017521
(v1.0)
A_51_P516850Rbbp5NM_172517213464
11P1.2080.31P
0017521
(v1.0)
A_52_P519416Rbbp5BC060186213464
11P1.1220.458P
Proteome N/A