DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0017521

Gene

Rbbp5

Synonyms

Description

retinoblastoma binding protein 5

Locus

NM_172517 UCSC: chr1:134373944-134402242(+) OLP: chr1:134373944-134402242(+)

DB links

Entrez 213464
MGI 1918367
Ensembl ENSMUSG00000026439

Feature

protein-coding

GO_BP

6 Terms

GO_MF

3 Terms

GO_CC

4 Terms

KEGG

see DBTMEE:2018035 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0017521 (v1.0)	Rbbp5	NM_172517	213464	30.462	27.688	9.23869	13.2944	7.37251

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0017521 (v1.0)	Rbbp5	NM_172517	213464	31.8508	2.72283	30.2082

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0017521 (v1.0)	Rbbp5	NM_172517	213464	31.0895	27.41	31.6357

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0017521 (v1.0)	Rbbp5	NM_172517	213464	31.8693	2.68554	34.6969

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0017521 (v1.0)	Rbbp5	NM_172517	213464	8.55359	12.8362	12.4796

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0017521 (v1.0)	Rbbp5	NM_172517	213464	27.1825	4.43279

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0017521 (v1.0)	Rbbp5	NM_172517	213464	4.39612	4.22152

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0017521 (v1.0)	7950	H3056H10-3	Mm.132868	4933411J24Rik	213464	U000803	NAP092992-001	4933411J24Rik;	TC893830,TC860073		U,F	3.476	3.5516	3.7531	3.4995	3.2626	3.3796	3.3001
0017521 (v1.0)	10433	H3096C07-3	Mm.132868	4933411J24Rik	213464	U000803	NAP104795-1	4933411J24Rik;	TC860076,TC860073		U,F	3.3592	3.4486	3.0828	3.4694	3.4182	3.4827	3.5261

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0017521 (v1.0)	1428886_at	Mm.132868	Rbbp5	NM_172517.2	213464	879.9	788.425	632.725	639.325	883.55

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0017521 (v1.0)	A_51_P516850	Rbbp5	NM_172517	213464	1	1	P	1.208	0.31	P
0017521 (v1.0)	A_52_P519416	Rbbp5	BC060186	213464	1	1	P	1.122	0.458	P

N/A