DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017523
GeneRbbp7
Synonyms
Desc.retinoblastoma binding protein 7
LocusNM_009031 chrX:159198304-159217022(+)
DB links


Entrez 245688
MGI 1194910
Ensembl ENSMUSG00000031353
Vega OTTMUSG00000017256
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018037
(v2.0)
Rbbp7NM_009031245688
65.8847622.417802.488169.851221.27191.1293171.44509.013285.191106.437
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017523
(v1.0)
Rbbp7245688
Maternal RNA0.98007
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018037
(v2.0)
Rbbp7245688
395/1820.6024236/1820.2574106/1822.7416283/1821.953413/182-1.675399/182-1.4638
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018037
(v2.0)
Rbbp7245688
231/741.119126/740.6446104/743.8868264/743.12341/74-3.230629/74-1.8967
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018037
(v2.0)
Rbbp7245688
50.970712640.45
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018037
(v2.0)
Rbbp7245688
13.24868016.56
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017523
(v1.0)
Rbbp7NM_009031245688
646.818553.122126.398153.347121.728
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017523
(v1.0)
Rbbp7NM_009031245688
5025.422990.851273.611993.261775.83
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017523
(v1.0)
Rbbp7NM_009031245688
676.30724.0947603.468
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017523
(v1.0)
Rbbp7NM_009031245688
660.143547.568376.889
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017523
(v1.0)
Rbbp7NM_009031245688
6286.863121.72
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017523
(v1.0)
Rbbp7NM_009031245688
676.723.7647413.359
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017523
(v1.0)
Rbbp7NM_009031245688
117.025148.063197.157
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017523
(v1.0)
Rbbp7NM_009031245688
417.449454.525
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017523
(v1.0)
Rbbp7NM_009031245688
379.75349.9661
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017523
(v1.0)
Rbbp7NM_009031245688
876.619969.202
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017523
(v1.0)
1128C0180B09-3Mm.1603Rbbp719648
4.8394.93974.02813.94733.96714.00554.0812
0017523
(v1.0)
9210H3078B05-3Mm.1603Rbbp719648
U039848NAP120742-001TC864727Q60973U,F,22.95823.08462.62613.00613.08632.84462.8121
0017523
(v1.0)
17884L0028F03-3Mm.1603237081
U020375NAP120741-001Rbbp7TC824374,TC824372,TC824367,TC824363,TC824361Q60973U,F,25.23165.62074.64124.64224.44894.60874.6695
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017523
(v1.0)
1415775_atMm.270186Rbbp7NM_009031.3245688
4989.59296.8753024.2253272.952783.55
0017523
(v1.0)
1456227_x_atMm.270186Rbbp7NM_009031.3245688
4833.5257917.3253863.45040.6253404.225
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017523
(v1.0)
A_51_P114385Rbbp7NM_009031245688
11P0.6360.138P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017523
(v1.0)
Rbbp7245688
58.57.5823.520.5