DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017601
GeneRchy1
SynonymsPirh2
PRO1996
Zfp363
Desc.ring finger and CHY zinc finger domain containing 1
LocusNR_073442 chr5:92377868-92391582(-)
NM_001271797 chr5:92377868-92392094(-)
NM_026557 chr5:92377868-92392094(-)
DB links


Entrez 68098
MGI 1915348
Ensembl ENSMUSG00000029397
Vega OTTMUSG00000020371
Featureprotein-coding
GO(BP)
  •   5 Terms
      protein ubiquitination (GO:0016567)
      positive regulation of protein ubiquitination (GO:0031398)
      positive regulation of proteasomal ubiquitin-dependent protein catabolic process (GO:0032436)
      protein ubiquitination involved in ubiquitin-dependent protein catabolic process (GO:0042787)
      protein autoubiquitination (GO:0051865)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018119
(v2.0)
Rchy1NM_001271797,NM_026557,NR_07344268098
15.6201127.827297.44477.36842.359913.167723.5696236.34340.247215.4614
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017601
(v1.0)
Rchy168098
Minor ZGA0.98574
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018119
(v2.0)
Rchy168098
600/3750.1648512/3750.3323658/3754.36851684/3753.489410/375-3.0495139/375-2.0194
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018119
(v2.0)
Rchy168098
323/1760.3613277/1760.5356633/1765.35381530/1764.43163/176-3.435465/176-2.0113
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018119
(v2.0)
Rchy168098
49.2889949.79
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018119
(v2.0)
Rchy168098
10.17865817.55
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017601
(v1.0)
Rchy1NM_02655768098
137.456212.95659.723830.441317.086
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017601
(v1.0)
Rchy1FR155735,NM_02655768098
294.066396.879149.364102.40370.0568
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017601
(v1.0)
Rchy1NM_02655768098
143.7235.87108232.339
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017601
(v1.0)
Rchy1NM_02655768098
140.288210.818181.245
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017601
(v1.0)
Rchy1FR155735,NM_02655768098
1263.852800.39
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017601
(v1.0)
Rchy1NM_02655768098
143.8065.79067198.784
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017601
(v1.0)
Rchy1NM_02655768098
55.294929.392328.8786
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017601
(v1.0)
Rchy1FR155735,NM_02655768098
267.124425.276
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017601
(v1.0)
Rchy1NM_02655768098
35.738620.594
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017601
(v1.0)
Rchy1NM_02655768098
333.871308.35
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017601
(v1.0)
18509L0210H02-3Mm.1820056720407C15Rik68098
U026398NAP074374-16720407C15Rik;TC842665,TC842664Q9CR50U,F,24.15484.28164.32774.05593.68293.84973.7006
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017601
(v1.0)
1432144_a_atMm.159453Rchy1NM_026557.368098
1634.63316.8751456.825247.575271.725
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017601
(v1.0)
A_51_P374305Rchy1NM_02655768098
11P0.8440.338P
0017601
(v1.0)
A_52_P279226Rchy1NM_02655768098
11P0.610.204P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017601
(v1.0)
Rchy168098
011011