DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017662
GeneRer1
Synonyms
Desc.RER1 retention in endoplasmic reticulum 1 homolog (S. cerevisiae)
LocusNM_026395 chr4:154448221-154460406(-)
DB links


Entrez 67830
MGI 1915080
Ensembl ENSMUSG00000029048
Vega OTTMUSG00000010595
Featureprotein-coding
GO(BP)
  •   1 Terms
      retrograde vesicle-mediated transport, Golgi to ER (GO:0006890)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018182
(v2.0)
Rer1NM_02639567830
54.516732.252222.472647.4881100.17293.821353.870728.899288.2764107.342
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017662
(v1.0)
Rer167830
MGA0.96766
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018182
(v2.0)
Rer167830
856/4990.2653514/499-0.0733398/4993.2438887/4992.155527/499-2.1097232/499-1.6978
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018182
(v2.0)
Rer167830
480/1940.791254/1940.2713383/1944.4986836/1943.42198/194-2.402895/194-1.614
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018182
(v2.0)
Rer167830
92.796413270.3
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018182
(v2.0)
Rer167830
36.78817350.39
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017662
(v1.0)
Rer1NM_02639567830
33.513515.48835.320169.534338.2711
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017662
(v1.0)
Rer1NM_02639567830
57.973425.519952.816118.44572.5706
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017662
(v1.0)
Rer1NM_02639567830
35.041419.937316.8978
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017662
(v1.0)
Rer1NM_02639567830
34.203915.332521.4209
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017662
(v1.0)
Rer1NM_02639567830
87.280585.9889
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017662
(v1.0)
Rer1NM_02639567830
35.061819.664223.4937
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017662
(v1.0)
Rer1NM_02639567830
32.700967.138260.9578
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017662
(v1.0)
Rer1NM_02639567830
108.071101.173
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017662
(v1.0)
Rer1NM_02639567830
31.033536.9658
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017662
(v1.0)
Rer1NM_02639567830
5.889177.67875
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017662
(v1.0)
1859C0263F11-3Mm.48591110060F11Rik67830
U033680NAP116440-12700002L06Rik;U,F,22.97312.97733.14663.46083.03743.09953.1012
0017662
(v1.0)
7017H3040E04-3Mm.48591110060F11Rik67830
1110060F11Rik3.33123.26563.41333.70133.42753.50953.4204
0017662
(v1.0)
14898J0904A09-3Mm.48591110060F11Rik67830
U025866NAP116324-11110060F11Rik;TC903863Q9CQU3U,F,23.76713.71724.03874.33993.96784.13614.1238
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017662
(v1.0)
1460706_s_atMm.241604Rer1NM_026395.167830
148.625090.625166.125201.875
0017662
(v1.0)
1460660_x_atMm.241604Rer1NM_026395.167830
350.7500296.925341.125
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017662
(v1.0)
A_51_P512002Rer1NM_02639567830
11P0.8580.368P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017662
(v1.0)
Rer167830
110110