DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017684
GeneRfc5
Synonyms36.5kDa
36kDa
Recc5
Desc.replication factor C (activator 1) 5
LocusNM_028128 chr5:117829154-117839032(-)
DB links


Entrez 72151
MGI 1919401
Ensembl ENSMUSG00000029363
Vega OTTMUSG00000025772
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018204
(v2.0)
Rfc5NM_02812872151
5.4198128.59860.037329.197135.860349.480130.797546.461634.419151.8914
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017684
(v1.0)
Rfc572151
1-Cell Transient0.97321
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018204
(v2.0)
Rfc572151
671/491-0.0621402/491-0.403873/4910.8357276/4910.498137/491-1.646249/491-1.5731
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018204
(v2.0)
Rfc572151
325/2020.1725203/202-0.108568/2021.9672211/2021.383113/202-1.8225105/202-1.5298
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018204
(v2.0)
Rfc572151
82.258513959.18
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018204
(v2.0)
Rfc572151
22.27117529.69
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017684
(v1.0)
Rfc5NM_02812872151
29.730441.456721.736424.821721.8653
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017684
(v1.0)
Rfc5NM_02812872151
129.272175.34898.689103.468125.394
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017684
(v1.0)
Rfc5NM_02812872151
31.08581.9820845.2302
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017684
(v1.0)
Rfc5NM_02812872151
30.342841.040434.3445
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017684
(v1.0)
Rfc5NM_02812872151
170.22271.295
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017684
(v1.0)
Rfc5NM_02812872151
31.10391.9549337.6679
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017684
(v1.0)
Rfc5NM_02812872151
20.124623.966423.8855
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017684
(v1.0)
Rfc5NM_02812872151
150.153143.767
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017684
(v1.0)
Rfc5NM_02812872151
9.119623.09599
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017684
(v1.0)
Rfc5NM_02812872151
30.294225.6037
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017684
(v1.0)
3685C0849F02-3Mm.27997Rfc572151
U026653NAP122192-001Rfc5;TC805400Q9D0F6U,F,23.71053.61923.16793.27783.26893.22293.3548
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017684
(v1.0)
1452917_atMm.27997Rfc5NM_028128.172151
199.25374.925423.7165.9429.475
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017684
(v1.0)
A_51_P246339Rfc5BC08900172151
11P0.8650.383P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017684
(v1.0)
Rfc572151
110110