DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017832
GeneRiok1
Synonyms
Desc.RIO kinase 1 (yeast)
LocusNM_024242 chr13:38128858-38153302(+)
DB links


Entrez 71340
MGI 1918590
Ensembl ENSMUSG00000021428
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Ribosome biogenesis in eukaryotes (mmu03008)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018352
(v2.0)
Riok1NM_02424271340
4.2385196.556360.18719.406120.16476.189489.50818316.04123.27696.23801
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017832
(v1.0)
Riok171340
Minor ZGA0.98665
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018352
(v2.0)
Riok171340
740/4610.1696534/4610.0957336/4613.1116905/4612.298226/461-2.0489220/461-1.6598
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018352
(v2.0)
Riok171340
359/2050.2942242/2050.1226315/2054.1424770/2053.224810/205-2.191388/205-1.8018
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018352
(v2.0)
Riok171340
65.267915442.38
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018352
(v2.0)
Riok171340
21.540910720.13
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017832
(v1.0)
Riok1NM_02424271340
204.237249.56514.434113.95896.73239
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017832
(v1.0)
Riok1FR221831,NM_02424271340
2338.682375.31144.247156.9663.607
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017832
(v1.0)
Riok1NM_02424271340
213.5491.55006272.28
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017832
(v1.0)
Riok1NM_02424271340
208.445247.059234.174
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017832
(v1.0)
Riok1FR221831,NM_02424271340
4747.223546.74
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017832
(v1.0)
Riok1NM_02424271340
213.6731.52883256.834
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017832
(v1.0)
Riok1NM_02424271340
13.363813.477916.2155
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017832
(v1.0)
Riok1FR221831,NM_02424271340
37.048736.8911
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017832
(v1.0)
Riok1NM_02424271340
228.8688.4739
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017832
(v1.0)
Riok1NM_02424271340
150.567157.354
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017832
(v1.0)
4645C0946A08-3Mm.1968255430416A05Rik71340
NAP047068-1TC8378843.88544.21694.68614.45223.96314.33384.0527
0017832
(v1.0)
11772H3122G12-3Mm.1968255430416A05Rik71340
U014736NAP091664-13110046C13Rik;5430416A05Rik;TC810357Q9CU84U,F,24.09284.1313.57373.48053.17453.38053.2657
0017832
(v1.0)
20429L0546A09-3Mm.1968255430416A05Rik71340
NAP100308-0012.51422.61972.68322.53482.37142.4072.2147
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017832
(v1.0)
1449346_s_atMm.297130Riok1NM_024242.371340
1101.651510.2391.075152.3112.175
0017832
(v1.0)
1459851_x_atMm.297130Riok1NM_024242.371340
1442.21687.725000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017832
(v1.0)
A_51_P498242Riok1NM_02424271340
11P0.9120.524P
0017832
(v1.0)
A_52_P126146Riok1NM_02424271340
11P0.6770.16P
0017832
(v1.0)
A_52_P74183Riok1NM_02424271340
11P0.9580.741P
Proteome N/A