DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017904
GeneRnf146
SynonymsIduna
Desc.ring finger protein 146
LocusNM_026518 chr10:29063982-29082248(-)
NM_001110198 chr10:29063982-29082248(-)
NM_001110197 chr10:29063982-29082248(-)
NM_001110196 chr10:29063982-29082248(-)
DB links


Entrez 68031
MGI 1915281
Ensembl ENSMUSG00000038876
Vega OTTMUSG00000028056
Featureprotein-coding
GO(BP)
  •   6 Terms
      metabolic process (GO:0008152)
      Wnt receptor signaling pathway (GO:0016055)
      protein ubiquitination involved in ubiquitin-dependent protein catabolic process (GO:0042787)
      protein autoubiquitination (GO:0051865)
      protein K48-linked ubiquitination (GO:0070936)
      positive regulation of canonical Wnt receptor signaling pathway (GO:0090263)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018431
(v2.0)
Rnf146NM_001110196,NM_001110197,NM_001110198,NM_001284279,NM_02651868031
12.807630.38767.803536.562112.058816.082713.05453.865915.394214.5819
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017904
(v1.0)
Rnf14668031
Minor ZGA0.99533
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018431
(v2.0)
Rnf14668031
713/3450.5332520/3450.4745345/3453.55541457/3453.4001114/3450.4555552/3450.0785
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018431
(v2.0)
Rnf14668031
378/1540.7787246/1540.5565324/1544.56921235/1544.312630/154-0.2933183/154-0.3479
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018431
(v2.0)
Rnf14668031
34.59789436.81
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018431
(v2.0)
Rnf14668031
11.0396716.48
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017904
(v1.0)
Rnf146NM_001110196,NM_001110197,NM_001110198,NM_02651868031
28.47742.469124.56577.579988.21331
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017904
(v1.0)
Rnf146NM_001110196,NM_001110197,NM_001110198,NM_02651868031
67.50488.934347.394216.698317.0466
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017904
(v1.0)
Rnf146NM_001110196,NM_001110197,NM_001110198,NM_02651868031
29.77534.2849246.3347
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017904
(v1.0)
Rnf146NM_001110196,NM_001110197,NM_001110198,NM_02651868031
29.063642.042635.9797
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017904
(v1.0)
Rnf146NM_001110196,NM_001110197,NM_001110198,NM_02651868031
32.923432.9403
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017904
(v1.0)
Rnf146NM_001110196,NM_001110197,NM_001110198,NM_02651868031
29.79264.2262439.4614
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017904
(v1.0)
Rnf146NM_001110196,NM_001110197,NM_001110198,NM_02651868031
22.7447.318779.63691
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017904
(v1.0)
Rnf146NM_001110196,NM_001110197,NM_001110198,NM_02651868031
6.327297.9459
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017904
(v1.0)
Rnf146NM_001110196,NM_001110197,NM_001110198,NM_02651868031
21.08978.06392
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017904
(v1.0)
Rnf146NM_001110196,NM_001110197,NM_001110198,NM_02651868031
7.521118.96754
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017904
(v1.0)
11678H3121D08-3Mm.289302610509H23Rik68031
U031640NAP115904-11700028A24Rik;2610509H23Rik;TC870205Q9CTK2U,F,23.43293.51653.58913.32053.12283.33023.0646
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017904
(v1.0)
1417733_atMm.475694Rnf146NM_001110197.1,NM_001110198.1,NM_001110196.1,NM_026518.468031
1383.41798.7251186277.15430.35
0017904
(v1.0)
1425001_atMm.475694Rnf146NM_001110197.1,NM_001110198.1,NM_001110196.1,NM_026518.468031
86.6104.55000
0017904
(v1.0)
1425713_a_atMm.475694Rnf146NM_001110197.1,NM_001110198.1,NM_001110196.1,NM_026518.468031
129.15214.125136.37500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017904
(v1.0)
A_51_P514684Rnf146NM_02651868031
11P1.2710.251P
0017904
(v1.0)
A_52_P256399Rnf146NM_02651868031
11P0.5030.123P
Proteome N/A