DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017927
GeneRnf2
SynonymsdinG
Ring1B
Desc.ring finger protein 2
LocusNM_011277 chr1:153316536-153347953(-)
DB links


Entrez 19821
MGI 1101759
Ensembl ENSMUSG00000026484
Featureprotein-coding
GO(BP)
  •   8 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018454
(v2.0)
Rnf2NM_01127719821
7.7661282.6578138.313140.085146.90343.005816.1224101.36124.18840.7207
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017927
(v1.0)
Rnf219821
2-Cell Transient0.88165
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018454
(v2.0)
Rnf219821
690/3740.3699470/3740.2129311/3743.2935801/3742.422265/374-0.4607375/374-0.5935
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018454
(v2.0)
Rnf219821
381/1191.1593234/1190.8539302/1194.8093755/1193.968518/119-0.6387118/119-0.6052
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018454
(v2.0)
Rnf219821
50.325713038.71
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018454
(v2.0)
Rnf219821
14.50168916.29
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017927
(v1.0)
Rnf2NM_01127719821
85.899195.2564104.182102.02611.2958
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017927
(v1.0)
Rnf2NM_01127719821
240.612222.31218.368224.50428.3285
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017927
(v1.0)
Rnf2NM_01127719821
89.81542.84015103.927
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017927
(v1.0)
Rnf2NM_01127719821
87.668794.374.9585
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017927
(v1.0)
Rnf2NM_01127719821
229.031144.353
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017927
(v1.0)
Rnf2NM_01127719821
89.86762.8012582.212
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017927
(v1.0)
Rnf2NM_01127719821
96.456298.509785.8244
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017927
(v1.0)
Rnf2NM_01127719821
210.152204.622
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017927
(v1.0)
Rnf2NM_01127719821
66.733472.2183
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017927
(v1.0)
Rnf2NM_01127719821
28.050244.7577
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017927
(v1.0)
5165Y12880.1Rnf219821
U021884NAP003427-001Rnf2;TC904137,TC904134,TC904133O35699U,F,22.64772.53711.9012.20032.32122.25492.3039
0017927
(v1.0)
8156H3060G06-3Mm.31512Rnf219821
U021884NAP003427-001Rnf2;TC904134,TC904133O35699U,F,23.73483.69683.09363.25383.0863.04423.1181
0017927
(v1.0)
9083H3076C04-3Mm.31512Rnf219821
U021884NAP003427-001Rnf2;TC904134,TC904133O35699U,F,23.15813.26743.29763.08262.67482.93572.7191
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017927
(v1.0)
1451519_atMm.482250Rnf2NM_011277.219821
590.45573.4682.8422.225330.8
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017927
(v1.0)
A_51_P382253Rnf2NM_01127719821
11P0.7160.185P
0017927
(v1.0)
A_52_P149743Rnf2NM_01127719821
11P1.0060.959P
Proteome N/A