DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017928
GeneRnf20
Synonyms
Desc.ring finger protein 20
LocusNM_001163263 chr4:49644932-49669758(+)
NM_182999 chr4:49644932-49669758(+)
DB links


Entrez 109331
MGI 1925927
Ensembl ENSMUSG00000028309
Vega OTTMUSG00000006927
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018455
(v2.0)
Rnf20NM_001163263,NM_182999109331
10.208437.484392.4601142.54588.848310.614114.150668.118876.37129.65859
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017928
(v1.0)
Rnf20109331
2-Cell Transient0.95451
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018455
(v2.0)
Rnf20109331
643/458-0.0233460/458-0.1097246/4582.6725440/4581.268854/458-1.0131458/458-0.5977
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018455
(v2.0)
Rnf20109331
282/1770.1583201/1770.0669241/1773.9567421/1772.564412/177-1.742985/177-1.6402
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018455
(v2.0)
Rnf20109331
63.260815540.81
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018455
(v2.0)
Rnf20109331
17.225810616.25
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017928
(v1.0)
Rnf20NM_001163263,NM_182999109331
38.956564.1823106.12261.59349.94419
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017928
(v1.0)
Rnf20NM_001163263,NM_182999109331
152.817239.723453.637281.92734.8911
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017928
(v1.0)
Rnf20NM_001163263,NM_182999109331
40.73263.733670.0243
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017928
(v1.0)
Rnf20NM_001163263,NM_182999109331
39.759163.537950.5222
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017928
(v1.0)
Rnf20NM_001163263,NM_182999109331
1372.01916.319
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017928
(v1.0)
Rnf20NM_001163263,NM_182999109331
40.75633.6824655.4111
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017928
(v1.0)
Rnf20NM_001163263,NM_182999109331
98.252159.470852.8011
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017928
(v1.0)
Rnf20NM_001163263,NM_182999109331
391.092348.241
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017928
(v1.0)
Rnf20NM_001163263,NM_182999109331
41.705839.6893
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017928
(v1.0)
Rnf20NM_001163263,NM_182999109331
22.233127.3096
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017928
(v1.0)
1452361_atMm.24765Rnf20NM_001163263.1,NM_182999.2109331
64.65133.77583.1500
0017928
(v1.0)
1449664_s_atMm.24765Rnf20NM_001163263.1,NM_182999.2109331
327.85548.6648.075345.975197.15
0017928
(v1.0)
1444146_atMm.24765Rnf20NM_001163263.1,NM_182999.2109331
00173.5500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017928
(v1.0)
A_51_P328769Rnf20NM_182999109331
11P0.9070.506P
Proteome N/A