DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017940
GeneRnf25
SynonymsAO7
Desc.ring finger protein 25
LocusNM_021313 chr1:74640326-74647971(-)
DB links


Entrez 57751
MGI 1890215
Ensembl ENSMUSG00000026171
Vega OTTMUSG00000021746
Featureprotein-coding
GO(BP)
  •   2 Terms
      protein ubiquitination (GO:0016567)
      positive regulation of NF-kappaB transcription factor activity (GO:0051092)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018468
(v2.0)
Rnf25NM_02131357751
17.7151119.166115.24717.154731.438421.605414.8752136.16336.314223.3817
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017940
(v1.0)
Rnf2557751
Maternal RNA0.99414
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018468
(v2.0)
Rnf2557751
630/4220.0651477/4220.0604523/4223.87251435/4223.089435/422-1.5076214/422-1.5722
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018468
(v2.0)
Rnf2557751
319/1830.2875236/1830.2495490/1834.93231281/1834.12018/183-2.320460/183-2.18
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018468
(v2.0)
Rnf2557751
77.679313159.3
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018468
(v2.0)
Rnf2557751
21.91647230.44
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017940
(v1.0)
Rnf25NM_02131357751
123.89879.975412.793321.800110.4509
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017940
(v1.0)
Rnf25NM_02131357751
1030.22603.078100.931167.56763.8293
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017940
(v1.0)
Rnf25NM_02131357751
129.5476.4785887.255
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017940
(v1.0)
Rnf25NM_02131357751
126.45179.1724100.975
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017940
(v1.0)
Rnf25NM_02131357751
570.528557.881
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017940
(v1.0)
Rnf25NM_02131357751
129.6226.38985110.746
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017940
(v1.0)
Rnf25NM_02131357751
11.844621.048825.1091
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017940
(v1.0)
Rnf25NM_02131357751
251.228334.847
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017940
(v1.0)
Rnf25NM_02131357751
15.1470.456078
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017940
(v1.0)
Rnf25NM_02131357751
15.13817.89576
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017940
(v1.0)
14042J0257F12-3Mm.86910Rnf2557751
U021481NAP005005-001Rnf25;TC864689Q9CS30U,F3.07963.19073.09582.89713.05852.90992.9448
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017940
(v1.0)
1448674_atMm.280920Rnf25NM_021313.257751
157.375204.367.3032.65
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017940
(v1.0)
Rnf2557751
221241