DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017951
GeneRnf44
Synonyms
Desc.ring finger protein 44
LocusNR_027395 chr13:54780760-54795321(-)
NR_027396 chr13:54780760-54795321(-)
NM_001146026 chr13:54780760-54789169(-)
NM_001146027 chr13:54780760-54789561(-)
NM_001146025 chr13:54780760-54789169(-)
NM_134064 chr13:54780760-54789169(-)
DB links


Entrez 105239
MGI 2145310
Ensembl ENSMUSG00000034928
Vega OTTMUSG00000032674
Featureprotein-coding
GO(BP)
GO(MF)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018479
(v2.0)
Rnf44NM_001146025,NM_001146026,NM_001146027,NM_134064,NR_027395,NR_027396105239
82.74126.777795.3680717.54618.597529.16955.547689.0132512.348625.979
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017951
(v1.0)
Rnf44105239
Major ZGA0.99076
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018479
(v2.0)
Rnf44105239
921/5870.1368518/587-0.2961401/5874.82763613/5873.94737/587-4.1496116/587-2.9223
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018479
(v2.0)
Rnf44105239
404/1860.6036251/1860.3147800/1865.61641891/1864.65844/186-3.191440/186-2.7707
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018479
(v2.0)
Rnf44105239
51.434814236.22
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018479
(v2.0)
Rnf44105239
12.41189712.8
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017951
(v1.0)
Rnf44NM_001146025,NM_001146026,NM_001146027,NM_134064105239
7.040083.7134413.007412.8523.82885
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017951
(v1.0)
Rnf44NM_001146025,NM_001146026,NM_001146027,NM_134064,NR_027395,NR_027396105239
114.33452.6131170.777160.90537.9466
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017951
(v1.0)
Rnf44NM_001146025,NM_001146026,NM_001146027,NM_134064105239
7.3610530.07364.05144
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017951
(v1.0)
Rnf44NM_001146025,NM_001146026,NM_001146027,NM_134064105239
7.185123.676156.63186
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017951
(v1.0)
Rnf44NM_001146025,NM_001146026,NM_001146027,NM_134064,NR_027395,NR_027396105239
46.813284.2203
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017951
(v1.0)
Rnf44NM_001146025,NM_001146026,NM_001146027,NM_134064105239
7.3653329.66177.2736
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017951
(v1.0)
Rnf44NM_001146025,NM_001146026,NM_001146027,NM_134064105239
12.042912.40918.49818
SOLiD_NMNR_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017951
(v1.0)
Rnf44NM_001146025,NM_001146026,NM_001146027,NM_134064105239
4.0127514.3684
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017951
(v1.0)
Rnf44NM_001146025,NM_001146026,NM_001146027,NM_134064105239
2.707334.32588
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017951
(v1.0)
10986H3106E06-3Mm.25366Rnf44105239
U034801NAP009668-001Rnf44;TC824982U,F,23.02232.37091.67093.03652.58392.79162.7094
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017951
(v1.0)
1423532_atMm.25366Rnf44NM_001146025.1,NM_134064.2,NM_001146026.1,NM_001146027.1105239
90.45118.425123.525164.625158.525
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017951
(v1.0)
A_51_P475249Rnf44NM_134064105239
11P0.9330.613P
Proteome N/A