DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017998
GeneRpap3
SynonymsD15Ertd682e
Desc.RNA polymerase II associated protein 3
LocusNM_028003 chr15:97505536-97536253(-)
DB links


Entrez 71919
MGI 1277218
Ensembl ENSMUSG00000022466
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018525
(v2.0)
Rpap3NM_02800371919
5.7203626.042729.524152.705378.88288.6245112.311723.606868.01398.94183
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017998
(v1.0)
Rpap371919
MGA0.99538
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018525
(v2.0)
Rpap371919
627/4210.0617420/421-0.119387/4211.3018198/4210.241665/421-0.6297478/421-0.415
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018525
(v2.0)
Rpap371919
303/1790.2453192/179-0.01585/1792.4489184/1791.358712/179-1.758895/179-1.4985
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018525
(v2.0)
Rpap371919
122.875717968.65
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018525
(v2.0)
Rpap371919
43.14648948.48
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017998
(v1.0)
Rpap3NM_02800371919
27.054720.475439.225154.81518.66458
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017998
(v1.0)
Rpap3NM_02800371919
42.797421.543152.955773.414812.1069
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017998
(v1.0)
Rpap3NM_02800371919
28.28822.09222.3391
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017998
(v1.0)
Rpap3NM_02800371919
27.61220.269817.497
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017998
(v1.0)
Rpap3NM_02800371919
171.34979.3914
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017998
(v1.0)
Rpap3NM_02800371919
28.30462.0633419.1901
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017998
(v1.0)
Rpap3NM_02800371919
36.316352.926246.9525
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017998
(v1.0)
Rpap3NM_02800371919
72.619390.2684
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017998
(v1.0)
Rpap3NM_02800371919
27.848831.2592
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017998
(v1.0)
Rpap3NM_02800371919
35.466723.5771
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017998
(v1.0)
18296L0078C11-3Mm.122552310042P20Rik71919
U036603NAP009705-0012310042P20Rik;TC805457Q9D706U,F,23.8063.89933.61933.93333.18623.44333.1397
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017998
(v1.0)
1448555_atMm.12255Rpap3NM_028003.271919
418.65596.925449.825491.975207.625
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017998
(v1.0)
A_51_P354154D15Ertd682eNM_02800371919
11P1.1710.359P
Proteome N/A