DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0017999
GeneRpe
Synonyms
Desc.ribulose-5-phosphate-3-epimerase
LocusNM_025683 chr1:66747467-66766379(+)
DB links


Entrez 66646
MGI 1913896
Ensembl ENSMUSG00000026005
Vega OTTMUSG00000021851
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
  •   1 Terms
      intracellular membrane-bounded organelle (GO:0043231)
KEGG
  •   3 Terms
      Pentose phosphate pathway (mmu00030)
      Pentose and glucuronate interconversions (mmu00040)
      Metabolic pathways (mmu01100)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018526
(v2.0)
RpeNM_02568366646
6.9439543.75981.963736.112931.559432.277820.267354.359330.880639.1202
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0017999
(v1.0)
Rpe66646
Minor ZGA0.95237
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018526
(v2.0)
Rpe66646
606/3440.3033445/3440.254594/3441.6946216/3440.6561101/3440.2866423/344-0.3001
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018526
(v2.0)
Rpe66646
298/1430.5433185/1430.253791/1432.8473190/1431.723722/143-0.6199105/143-1.0344
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018526
(v2.0)
Rpe66646
68.767612455.46
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018526
(v2.0)
Rpe66646
16.3536824.05
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017999
(v1.0)
RpeNM_02568366646
45.462456.618126.885921.923514.3136
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0017999
(v1.0)
RpeNM_02568366646
53.769957.282728.444831.108921.5403
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0017999
(v1.0)
RpeNM_02568366646
47.53512.5394861.7716
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0017999
(v1.0)
RpeNM_02568366646
46.39956.049640.2774
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0017999
(v1.0)
RpeNM_02568366646
299.613650.226
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0017999
(v1.0)
RpeNM_02568366646
47.56282.504744.1749
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0017999
(v1.0)
RpeNM_02568366646
24.892221.16821.2965
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0017999
(v1.0)
RpeNM_02568366646
33.771731.3046
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0017999
(v1.0)
RpeNM_02568366646
9.7362733.2123
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0017999
(v1.0)
RpeNM_02568366646
8.0220616.6011
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0017999
(v1.0)
4965G0116G01-3Mm.436715730518J08Rik66646
U000392NAP122352-0015730518J08Rik;TC793933,TC793932Q91VZ4U,F,23.99223.86093.03683.10142.9743.06153.1682
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0017999
(v1.0)
1416705_atMm.240912RpeNM_025683.266646
101.12599103.15135.175219.925
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0017999
(v1.0)
A_51_P163389RpeNM_02568366646
11P0.6330.157P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0017999
(v1.0)
Rpe66646
787161525