DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018014
GeneRpl13
SynonymsL13
Desc.ribosomal protein L13
LocusNM_016738 chr8:125626250-125629142(+)
DB links


Entrez 270106
MGI 105922
Ensembl ENSMUSG00000000740
Vega OTTMUSG00000016486
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018541
(v2.0)
Rpl13NM_016738270106
1588.77119.4499.22911430.2591372.677696.45580.1177.315171479.677868.55
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018014
(v1.0)
Rpl13270106
MGA0.97415
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018541
(v2.0)
Rpl13270106
552/406-0.0695372/406-0.2417106/4061.6347261/4060.690524/406-1.9784154/406-1.9873
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018541
(v2.0)
Rpl13270106
256/1670.1029145/167-0.317994/1672.686245/1671.868512/167-1.66174/167-1.753
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018541
(v2.0)
Rpl13270106
84.080116052.55
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018541
(v2.0)
Rpl13270106
37.066210934.01
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018014
(v1.0)
Rpl13NM_016738270106
124.1816.40797320.517952.079408.577
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018014
(v1.0)
Rpl13NM_016738270106
0.54998802.918743.675942.73371
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018014
(v1.0)
Rpl13NM_016738270106
129.843581.0296.99124
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018014
(v1.0)
Rpl13NM_016738270106
126.7396.343635.41348
SOLiD_NMNR_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018014
(v1.0)
Rpl13NM_016738270106
129.918573.0715.93733
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018014
(v1.0)
Rpl13NM_016738270106
296.749919.271029.21
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018014
(v1.0)
Rpl13NM_016738270106
3.636233.92084
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018014
(v1.0)
Rpl13NM_016738270106
3.62124194.872
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018014
(v1.0)
Rpl13NM_016738270106
0.545680.563112
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018014
(v1.0)
11316H3111G11-3Rpl1319898
U041348NAP023731-001TC902993,TC902984,TC902980,TC902979,TC902978,TC9029753.14793.12093.82914.73534.56814.7884.6323
0018014
(v1.0)
12151H3136C02-5Mm.42578Rpl1319898
U028851NAP008187-001TC832390Q9D1R13.0112.95263.34453.20652.85762.99392.8274
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018014
(v1.0)
1450150_a_atMm.391834~Mm.440066~Mm.319719Gm12918~Gm15710~Rpl13~~NM_016738.5100039656
100040605
270106
440.950486.8753080.352299.6
0018014
(v1.0)
1460581_a_atMm.391834~Mm.440066~Mm.319719Gm12918~Gm15710~Rpl13~~NM_016738.5100039656
100040605
270106
917.02501113.96283.23972.975
0018014
(v1.0)
1455245_x_atMm.391834~Mm.440066~Mm.319719Gm12918~Gm15710~Rpl13~~NM_016738.5100039656
100040605
270106
1188.8142.1251386.46721.14383.125
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018014
(v1.0)
A_51_P203420Rpl13NM_016738270106
11P0.4930.0897P
0018014
(v1.0)
A_52_P668076Rpl13NM_016738270106
11P0.4340.076P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018014
(v1.0)
Rpl13270106
600900