DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018032
GeneRpl29
SynonymsRpl43
Desc.ribosomal protein L29
LocusNM_009082 chr9:106331870-106333898(+)
DB links


Entrez 19944
MGI 99687
Ensembl ENSMUSG00000048758
Vega OTTMUSG00000033747
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018560
(v2.0)
Rpl29NM_00908219944
736.319103.27822.5697255.636717.6952628.32276.50320.733745.193347.53
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018032
(v1.0)
Rpl2919944
MGA0.98226
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018560
(v2.0)
Rpl2919944
609/4220.0163347/422-0.3974103/4221.5395251/4220.578930/422-1.7233241/422-1.4019
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018560
(v2.0)
Rpl2919944
249/1500.217145/150-0.164101/1502.9324227/1501.91142/150-3.625655/150-2.0172
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018560
(v2.0)
Rpl2919944
71.053613253.83
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018560
(v2.0)
Rpl2919944
21.19337926.83
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018032
(v1.0)
Rpl29NM_00908219944
107.35615.7144190.443497.782199.525
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018032
(v1.0)
Rpl29FR163847,NM_00908219944
3.097620.61876210.803837.93186.09065
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018032
(v1.0)
Rpl29NM_00908219944
112.251269.27917.1447
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018032
(v1.0)
Rpl29NM_00908219944
109.56815.556615.3813
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018032
(v1.0)
Rpl29FR163847,NM_00908219944
0.3039870.628951
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018032
(v1.0)
Rpl29NM_00908219944
112.316265.59116.8696
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018032
(v1.0)
Rpl29NM_00908219944
176.32480.628516.843
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018032
(v1.0)
Rpl29FR163847,NM_00908219944
38.156430.8065
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018032
(v1.0)
Rpl29NM_00908219944
16.7781181.592
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018032
(v1.0)
Rpl29NM_00908219944
0.2062590.212848
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018032
(v1.0)
1030C0174A01-3Mm.2235Rpl2919944
U026638NAP093755-001TC874128,TC874127,TC874126,TC874125,TC874123,TC874122,TC874119,TC874117,TC874116,TC874115,TC874113,TC874111,TC874108,TC874106,TC874104P47915U,F,23.93324.03644.08164.77415.1345.11395.0101
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018032
(v1.0)
A_51_P400137Rpl29NM_00908219944
11P1.2110.314P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018032
(v1.0)
Rpl2919944
3401380