DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018038
GeneRpl34
Synonyms
Desc.ribosomal protein L34
LocusNM_026724 chr3:130429749-130433226(-)
NM_001005859 chr3:130429755-130432222(-)
DB links


Entrez 68436
MGI 1915686
Ensembl ENSMUSG00000062006
Vega OTTMUSG00000023379
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018566
(v2.0)
Rpl34NM_001005859,NM_001287581,NM_02672468436
1369.4822.09378.51037292.971031.935670.86333.9274.47271749.6416346.9
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018038
(v1.0)
Rpl34MGA0.99139
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018566
(v2.0)
Rpl3468436
663/4310.1083460/431-0.0222262/4312.8484516/4311.585489/431-0.2158504/431-0.3726
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018566
(v2.0)
Rpl3468436
358/2330.1064215/233-0.2311259/2333.686497/2332.411610/233-2.372592/233-1.9226
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018566
(v2.0)
Rpl3468436
88.771519844.83
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018566
(v2.0)
Rpl3468436
37.589314226.47
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018038
(v1.0)
Rpl34NM_001005859,NM_001199350,NM_02672468436
32.87548.50732311.9661014.56337.262
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018038
(v1.0)
Rpl34NM_001005859,NM_001199350,NM_02672468436
2.258030.1253148.3529237.60267.0573
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018038
(v1.0)
Rpl34NM_001005859,NM_001199350,NM_02672468436
34.3742685.8139.28168
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018038
(v1.0)
Rpl34NM_001005859,NM_001199350,NM_02672468436
33.55278.42194.78732
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018038
(v1.0)
Rpl34NM_001005859,NM_001199350,NM_02672468436
0.1271330.50193
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018038
(v1.0)
Rpl34NM_001005859,NM_001199350,NM_02672468436
34.3942676.4195.25057
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018038
(v1.0)
Rpl34NM_001005859,NM_001199350,NM_02672468436
288.832979.594736.303
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018038
(v1.0)
Rpl34NM_001005859,NM_001199350,NM_02672468436
35.855927.8063
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018038
(v1.0)
Rpl34NM_001005859,NM_001199350,NM_02672468436
6.60796456.846
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018038
(v1.0)
Rpl34NM_001005859,NM_001199350,NM_02672468436
46.50727.6905
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018038
(v1.0)
17929L0033F08-3Mm.1405681100001I22Rik68436
U044048NAP101076-11100001I22Rik;TC813863,TC813852,TC813850Q9D1R9U,F,23.46513.39513.8744.4764.9455.01734.9654
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018038
(v1.0)
1427875_a_atMm.423154~Mm.140568Gm10154~Rpl34~NM_026724.1,NM_001005859.2100040611
68436
1016122.31012.4256256.34068.575
0018038
(v1.0)
1438655_a_atMm.423154~Mm.140568Gm10154~Rpl34~NM_026724.1,NM_001005859.2100040611
68436
2071.025210.1251710.77510922.0756207.075
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018038
(v1.0)
A_51_P243283MGC103270NM_00100585968436
11P0.9470.683P
0018038
(v1.0)
A_51_P2432881100001I22RikNM_02672468436
11P0.6490.144P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018038
(v1.0)
Rpl3468436
001002