DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018040
GeneRpl35
Synonyms
Desc.ribosomal protein L35
LocusNM_025592 chr2:38857101-38860651(-)
DB links


Entrez 66489
MGI 1913739
Ensembl ENSMUSG00000062997
Vega OTTMUSG00000012348
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018568
(v2.0)
Rpl35NM_02559266489
1866.27609.82341.17091129.622918.875323.321313.6942.02482703.686180.72
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018040
(v1.0)
Rpl3566489
Major ZGA0.97626
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018568
(v2.0)
Rpl3566489
772/5120.0795418/512-0.4079308/5122.8387793/5121.95725/512-4.368989/512-3.1021
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018568
(v2.0)
Rpl3566489
320/1990.1717174/199-0.3082127/1992.879316/1991.98494/199-3.286836/199-3.0138
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018568
(v2.0)
Rpl3566489
56.984322824.99
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018568
(v2.0)
Rpl3566489
23.62789225.68
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018040
(v1.0)
Rpl35NM_02559266489
633.71228.3063841.4392026.14941.693
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018040
(v1.0)
Rpl35NM_02559266489
1.627440.3179971.197073.249420.59943
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018040
(v1.0)
Rpl35NM_02559266489
662.604682.51330.8828
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018040
(v1.0)
Rpl35NM_02559266489
646.76728.022131.2806
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018040
(v1.0)
Rpl35NM_02559266489
0.3232460.831156
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018040
(v1.0)
Rpl35NM_02559266489
662.989673.16534.3076
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018040
(v1.0)
Rpl35NM_02559266489
779.0421956.321873
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018040
(v1.0)
Rpl35NM_02559266489
3.214513.5787
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018040
(v1.0)
Rpl35NM_02559266489
121.096261.799
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018040
(v1.0)
Rpl35NM_02559266489
19.71389.3061
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018040
(v1.0)
11456H3115G05-3Mm.16423Rpl3566489
U022573NAP095150-001TC824406,TC824390,TC824383,TC824379U,F,23.70683.46213.96114.48514.63254.52864.5736
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018040
(v1.0)
1416243_a_atMm.345333Rpl35NM_025592.366489
856.550547.651471.1251105.15
0018040
(v1.0)
1434231_x_atMm.345333Rpl35NM_025592.366489
3290.925275.2751751.26207.8753951.775
0018040
(v1.0)
1454856_x_atMm.345333Rpl35NM_025592.366489
1700.4167.651018.4253464.0752137.8
0018040
(v1.0)
1436840_x_atMm.345333Rpl35NM_025592.366489
2521.125199.5251501.3755184.253257.675
0018040
(v1.0)
1455950_x_atMm.345333Rpl35NM_025592.366489
2583.325222.1751612.154994.73268
0018040
(v1.0)
1454833_atMm.345333Rpl35NM_025592.366489
00061.850
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018040
(v1.0)
A_51_P132715Rpl35NM_02559266489
11P1.0870.557P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018040
(v1.0)
Rpl3566489
1313131