DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018049
GeneRpl39l
Synonyms
Desc.ribosomal protein L39-like
LocusNM_026594 chr16:10170321-10175004(+)
DB links


Entrez 68172
MGI 1915422
Ensembl ENSMUSG00000039209
Vega OTTMUSG00000027599
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018577
(v2.0)
Rpl39lNM_02659468172
146.35975.715916.3657225.421573.32319.28580.29343612.5056409.6828.0987
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018049
(v1.0)
Rpl39l68172
MGA0.98222
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018577
(v2.0)
Rpl39l68172
613/4100.0673452/4100.024423/410-0.5355180/4100.1428105/4100.0917645/4100.0542
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018577
(v2.0)
Rpl39l68172
311/1800.2747221/1800.178922/1800.5387112/1800.639642/180-0.0408275/1800.012
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018577
(v2.0)
Rpl39l68172
42.13458251.38
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018577
(v2.0)
Rpl39l68172
9.9164820.66
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018049
(v1.0)
Rpl39lNM_02659468172
78.666711.2231167.663396.1270.214755
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018049
(v1.0)
Rpl39lNM_02659468172
160.17727.2316319.692639.6430
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018049
(v1.0)
Rpl39lNM_02659468172
82.253253.524812.2447
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018049
(v1.0)
Rpl39lNM_02659468172
80.287311.11049.24678
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018049
(v1.0)
Rpl39lNM_02659468172
12.92919.70359
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018049
(v1.0)
Rpl39lNM_02659468172
82.30152.791710.1416
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018049
(v1.0)
Rpl39lNM_02659468172
155.23382.476283.948
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018049
(v1.0)
Rpl39lNM_02659468172
447.684329.975
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018049
(v1.0)
Rpl39lNM_02659468172
16.5576148.192
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018049
(v1.0)
Rpl39lNM_02659468172
21.196712.4609
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018049
(v1.0)
7090H3041G09-3Mm.236904930517K11Rik68172
U016786NAP009023-0014930517K11Rik;TC832466Q9CQD0U,F,23.25493.50513.72394.0284.19014.26664.1723
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018049
(v1.0)
1423327_atMm.23690Rpl39lNM_026594.268172
1121.55578.9751080.652926.7752446.75
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018049
(v1.0)
A_52_P3865444930517K11RikNM_02659468172
11P0.60.123P
Proteome N/A