DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018099
GeneRps21
Synonyms
Desc.ribosomal protein S21
LocusNM_025587 chr2:179992084-179993149(+)
DB links


Entrez 66481
MGI 1913731
Ensembl ENSMUSG00000039001
Vega OTTMUSG00000016278
Featureprotein-coding
GO(BP)
  •   5 Terms
      endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000447)
      endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000461)
      translation (GO:0006412)
      translational elongation (GO:0006414)
      ribosomal small subunit biogenesis (GO:0042274)
GO(MF)
  •   2 Terms
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018627
(v2.0)
Rps21NM_02558766481
3293.5169.900826.1605715.3841375.7110220.6737.3723.11341354.1612812.7
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018099
(v1.0)
Rps2166481
Major ZGA0.98423
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018627
(v2.0)
Rps2166481
662/473-0.0278287/473-0.8346166/4732.0625413/4731.131422/473-2.317144/473-2.3031
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018627
(v2.0)
Rps2166481
293/2050.0024133/205-0.7357160/2053.1695401/2052.28538/205-2.480849/205-2.6272
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018627
(v2.0)
Rps2166481
74.579615448.43
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018627
(v2.0)
Rps2166481
26.657710325.88
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018099
(v1.0)
Rps21NM_02558766481
72.56518.1268532.706953.895526.153
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018099
(v1.0)
Rps21FR165513,NM_025587,NR_03727466481
7.287493.5283760.8424181.11544.2456
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018099
(v1.0)
Rps21NM_02558766481
75.87341204.4719.7767
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018099
(v1.0)
Rps21NM_02558766481
74.059917.944817.1831
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018099
(v1.0)
Rps21FR165513,NM_02558766481
2.108373.24309
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018099
(v1.0)
Rps21NM_02558766481
75.91751187.9718.8459
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018099
(v1.0)
Rps21NM_02558766481
493.203921.024937.975
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018099
(v1.0)
Rps21FR165513,NM_025587,NR_03727466481
156.325114.262
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018099
(v1.0)
Rps21NM_02558766481
13.0209920.025
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018099
(v1.0)
Rps21NM_02558766481
64.902176.707
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018099
(v1.0)
11328H3112F04-32410030A14Rik66481
U002953NAP094779-0012410030A14Rik;TC874036,TC874032,TC874029,TC874028,TC874025,TC874017,TC874016,TC874015,TC874010Q9CQR2U,F,23.53143.47433.85464.58415.20285.05085.137
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018099
(v1.0)
1433721_x_atMm.289669Rps21NM_025587.266481
1254.625139.8751419.85641.74607.675
0018099
(v1.0)
1433549_x_atMm.289669Rps21NM_025587.266481
297.7541.475433.9751446.3778.275
0018099
(v1.0)
1434358_x_atMm.289669Rps21NM_025587.266481
866.8159.3751180.1753749.0752998.575
0018099
(v1.0)
1439415_x_atMm.289669Rps21NM_025587.266481
101.950128.15374.375191.6
0018099
(v1.0)
1430288_x_atMm.289669Rps21NM_025587.266481
3787.425504.854073.2520603.37519439.8
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018099
(v1.0)
A_51_P489959Rps21NM_02558766481
11P0.7770.24P
0018099
(v1.0)
A_52_P678800Rps21AK01061066481
11P0.590.119P
0018099
(v1.0)
A_52_P740562Rps21NM_02558766481
11P0.4510.0793P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018099
(v1.0)
Rps2166481
011016