DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018114
GeneRps6
SynonymsS6R
Desc.ribosomal protein S6
LocusNM_009096 chr4:86500003-86503271(-)
DB links


Entrez 20104
MGI 98159
Ensembl ENSMUSG00000028495
Vega OTTMUSG00000007781
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018643
(v2.0)
Rps6NM_00909620104
1027.9371.06614.8472406.4241318.396027.42396.5739.418711073.377029.89
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018114
(v1.0)
Rps620104
MGA0.98427
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018643
(v2.0)
Rps620104
614/443-0.0418441/443-0.1224232/4432.6351567/4431.681779/443-0.4249519/443-0.37
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018643
(v2.0)
Rps620104
292/215-0.0708188/215-0.3082224/2153.5874537/2152.637823/215-1.1331116/215-1.4775
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018643
(v2.0)
Rps620104
51.108312839.93
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018643
(v2.0)
Rps620104
18.48319319.87
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018114
(v1.0)
Rps6NM_00909620104
73.824610.2775302.2914.19282.212
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018114
(v1.0)
Rps6FR105990,NM_00909620104
0.4104860.863645.4323116.61186.63
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018114
(v1.0)
Rps6NM_00909620104
77.1904375.92411.213
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018114
(v1.0)
Rps6NM_00909620104
75.345410.17436.99048
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018114
(v1.0)
Rps6FR105990,NM_00909620104
0.3609330.0647989
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018114
(v1.0)
Rps6NM_00909620104
77.2352370.7757.66692
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018114
(v1.0)
Rps6NM_00909620104
279.79882.687742.604
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018114
(v1.0)
Rps6FR105990,NM_00909620104
3.458911.70594
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018114
(v1.0)
Rps6NM_00909620104
49.4147357.661
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018114
(v1.0)
Rps6NM_00909620104
0.2635950.0906717
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018114
(v1.0)
17612L0001H03-3Mm.1139Rps620104
3.1673.20323.7484.34664.60714.63114.5075
0018114
(v1.0)
17667L0005F11-3Mm.1139Rps620104
Rps62.79442.82213.32063.84433.93813.99693.8103
0018114
(v1.0)
17747L0012A05-3Mm.1139Rps620104
3.80163.36784.18614.98135.25055.18685.1326
0018114
(v1.0)
17877L0027F06-3Mm.1139Rps620104
U025233NAP100936-001TC798108,TC798106,TC798103,TC798098,TC798075,TC798071P10660U,F,23.83483.41844.29425.12925.23085.27745.2046
0018114
(v1.0)
19284L0264E06-3Mm.1139Rps620104
NAP032384-1TC798075,TC7980712.34792.65412.61682.95412.92663.14852.9485
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018114
(v1.0)
1416141_a_atMm.425090Rps620104
3365.5251125.4255770.32515908.89162.6
0018114
(v1.0)
1434377_x_atMm.425090Rps620104
2104.5534.654754.82513093.657878.925
0018114
(v1.0)
1454620_x_atMm.425090Rps620104
1171.575238.0253362.4511646.46743.6
0018114
(v1.0)
1435816_atMm.425090Rps620104
100.6750422.9808.175629.7
0018114
(v1.0)
1455693_x_atMm.425090Rps620104
1897.4350.3254452.811588.15607.4
0018114
(v1.0)
1455981_atMm.425090Rps620104
87.7250180.05544.1290.075
0018114
(v1.0)
1416142_atMm.425090Rps620104
000208.175218.9
0018114
(v1.0)
1453466_atMm.425090Rps620104
00045.325.875
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018114
(v1.0)
A_51_P344734Rps6NM_00909620104
11P0.4290.0867P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018114
(v1.0)
Rps620104
68317148