DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018121
GeneRps6kb1
Synonymsp70/85s6k
p70s6k
S6K1
Desc.ribosomal protein S6 kinase, polypeptide 1
LocusNM_001114334 chr11:86312513-86358309(-)
NM_028259 chr11:86327485-86358309(-)
DB links


Entrez 72508
MGI 1270849
Ensembl ENSMUSG00000020516
Vega OTTMUSG00000001198
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018650
(v2.0)
Rps6kb1NM_001114334,NM_02825972508
5.00615.421259.7207312.567712.51918.2793619.53568.9375511.55868.07355
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018121
(v1.0)
Rps6kb172508
MGA0.98888
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018650
(v2.0)
Rps6kb172508
593/3730.1556460/3730.1858162/3732.3606337/3731.179418/373-2.2533110/373-2.3452
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018650
(v2.0)
Rps6kb172508
300/1680.322227/1680.3163159/1683.4301314/1682.21676/168-2.562549/168-2.3416
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018650
(v2.0)
Rps6kb172508
47.191311242.14
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018650
(v2.0)
Rps6kb172508
11.13347315.25
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018121
(v1.0)
Rps6kb1NM_001114334,NM_02825972508
5.631786.723969.346218.6883413.7435
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018121
(v1.0)
Rps6kb1FR091586,FR161395,NM_001114334,NM_02825972508
119.583103.347155.958121.773148.734
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018121
(v1.0)
Rps6kb1NM_001114334,NM_02825972508
5.888541.830757.33599
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018121
(v1.0)
Rps6kb1NM_001114334,NM_02825972508
5.74786.656456.61157
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018121
(v1.0)
Rps6kb1FR091586,FR161395,NM_001114334,NM_02825972508
211.523156.538
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018121
(v1.0)
Rps6kb1NM_001114334,NM_02825972508
5.891961.805687.25135
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018121
(v1.0)
Rps6kb1NM_001114334,NM_02825972508
8.653138.388948.01699
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018121
(v1.0)
Rps6kb1FR091586,FR161395,NM_001114334,NM_02825972508
71.120677.5156
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018121
(v1.0)
Rps6kb1NM_001114334,NM_02825972508
6.0157915.3023
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018121
(v1.0)
Rps6kb1NM_001114334,NM_02825972508
3.227415.38067
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018121
(v1.0)
10020H3089F08-32610318I15Rik72508
U033223NAP122496-0012610318I15Rik;TC836573Q9DCN7U,F,22.51012.65172.5162.35062.15452.22072.2474
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018121
(v1.0)
1460705_atMm.394280Rps6kb1NM_001114334.1,NM_028259.472508
167.525210.1228.50157.45
0018121
(v1.0)
1459951_atMm.394280Rps6kb1NM_001114334.1,NM_028259.472508
000129.750
0018121
(v1.0)
1454956_atMm.394280Rps6kb1NM_001114334.1,NM_028259.472508
0000679.525
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018121
(v1.0)
A_51_P175205Rps6kb1AK07927872508
11P1.1060.557P
0018121
(v1.0)
A_52_P166482Rps6kb1AK01204572508
11P0.7640.275P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018121
(v1.0)
Rps6kb172508
020020