DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018151
GeneRrp1
SynonymsNNP-1
Nnp1
Desc.ribosomal RNA processing 1 homolog (S. cerevisiae)
LocusNM_010925 chr10:77863107-77875788(-)
DB links


Entrez 18114
MGI 1203500
Ensembl ENSMUSG00000061032
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018681
(v2.0)
Rrp1NM_01092518114
135.0179.669085.0988146.679785.859171.642926.38065.2256376.657578.8711
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018151
(v1.0)
Rrp118114
MGA0.99852
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018681
(v2.0)
Rrp118114
681/4340.1368404/434-0.219499/4343.76551148/4342.727620/434-2.3252250/434-1.3897
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018681
(v2.0)
Rrp118114
344/1680.5185212/1680.2182484/1685.031082/1683.99834/168-3.047962/168-2.0112
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018681
(v2.0)
Rrp118114
89.996916255.55
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018681
(v2.0)
Rrp118114
20.37468823.15
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018151
(v1.0)
Rrp1NM_01092518114
10.05143.5221834.724759.413618.7511
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018151
(v1.0)
Rrp1NM_01092518114
147.66120.8194431.783676.97256.392
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018151
(v1.0)
Rrp1NM_01092518114
10.509749.3773.84278
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018151
(v1.0)
Rrp1NM_01092518114
10.25853.486823.87947
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018151
(v1.0)
Rrp1NM_01092518114
115.293115.154
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018151
(v1.0)
Rrp1NM_01092518114
10.515848.70074.25487
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018151
(v1.0)
Rrp1NM_01092518114
32.149757.366253.1299
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018151
(v1.0)
Rrp1NM_01092518114
1859.151770.71
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018151
(v1.0)
Rrp1NM_01092518114
7.9536214.0083
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018151
(v1.0)
Rrp1NM_01092518114
0.6378510.179517
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018151
(v1.0)
13137H3158F11-3Nnp118114
U031972NAP007608-001Nnp1;TC942169,TC868640,TC868636,TC868633,TC868632P56183U,F,23.7373.83554.20424.41224.03214.21184.0762
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018151
(v1.0)
1427720_a_atMm.38344Rrp1NM_010925.218114
229.575143.225542.325905.55649.85
0018151
(v1.0)
1415957_a_atMm.38344Rrp1NM_010925.218114
0086.4138.1110.475
Agilent44K N/A
Proteome N/A