DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018165
GeneRsc1a1
SynonymsmRS1
OTTMUSG00000010365
RS1
Desc.regulatory solute carrier protein, family 1, member 1
LocusNM_023544 chr4:141239478-141241631(-)
DB links


Entrez 69994
MGI 3526447
Ensembl ENSMUSG00000040715
Vega OTTMUSG00000010365
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018695
(v2.0)
Rsc1a1NM_001017966,NM_02354469994
20.7402159.036188.2157.85595.029221.77913.6907204.37293.026623.4877
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018165
(v1.0)
Rsc1a1Maternal RNA0.91992
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018695
(v2.0)
Rsc1a169994
653/4460.0371408/446-0.244185/4461.1877271/4460.609764/446-0.7342454/446-0.5721
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018695
(v2.0)
Rsc1a169994
327/1860.2997209/1860.051776/1862.2375219/1861.554112/186-1.8129122/186-1.1977
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018695
(v2.0)
Rsc1a169994
134.301814791.36
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018695
(v2.0)
Rsc1a169994
55.81445994.6
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018165
(v1.0)
Rsc1a1NM_001017966,NM_02354469994
165.335130.434117.44865.92719.65039
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018165
(v1.0)
Rsc1a1FR208588,FR219100,NM_001017966,NM_02354469994
886.761604.995597.624343.4877.066
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018165
(v1.0)
Rsc1a1NM_001017966,NM_02354469994
172.8737.58327142.306
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018165
(v1.0)
Rsc1a1NM_001017966,NM_02354469994
168.741129.124151.25
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018165
(v1.0)
Rsc1a1FR208588,FR219100,NM_001017966,NM_02354469994
144.714170.249
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018165
(v1.0)
Rsc1a1NM_001017966,NM_02354469994
172.9737.47941165.886
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018165
(v1.0)
Rsc1a1NM_001017966,NM_02354469994
108.73963.655364.3481
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018165
(v1.0)
Rsc1a1FR208588,FR219100,NM_001017966,NM_02354469994
339.764405.821
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018165
(v1.0)
Rsc1a1NM_001017966,NM_02354469994
78.329330.5797
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018165
(v1.0)
Rsc1a1NM_001017966,NM_02354469994
83.6895111.333
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018165
(v1.0)
10949H3105H10-3Mm.178801700027M01Rik69994
U025731NAP007585-0011700027M01Rik;TC936043U,F,24.04583.99243.56613.75923.33173.43263.322
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018165
(v1.0)
A_51_P121622Rsc1a1AK00427369994
11P1.3420.208P
0018165
(v1.0)
A_51_P416736Rsc1a1NM_02354469994
11P2.8020.0629P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018165
(v1.0)
Rsc1a169994
010060