DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018220
GeneRusc1
Synonyms
Desc.RUN and SH3 domain containing 1
LocusNM_001083808 chr3:88887901-88893953(-)
NM_001083807 chr3:88887901-88897285(-)
NM_028188 chr3:88887901-88897285(-)
DB links


Entrez 72296
MGI 1919546
Ensembl ENSMUSG00000041263
Featureprotein-coding
GO(BP)
  •   1 Terms
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018752
(v2.0)
Rusc1NM_001083807,NM_001083808,NM_02818872296
15.59378.6363715.411953.208747.37323.376924.5407613.437648.07893.90652
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018220
(v1.0)
Rusc172296
Major ZGA0.98879
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018752
(v2.0)
Rusc172296
1101/5530.4799636/5530.08541671/5535.1663409/5533.9492592/5532.14772565/5531.6125
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018752
(v2.0)
Rusc172296
444/2270.4533249/2270.0172552/2274.81051400/2273.9411269/2272.28181184/2271.7791
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018752
(v2.0)
Rusc172296
50.319224320.71
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018752
(v2.0)
Rusc172296
7.54731375.51
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018220
(v1.0)
Rusc1NM_001083807,NM_001083808,NM_02818872296
8.9808310.701539.619632.83563.237
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018220
(v1.0)
Rusc1NM_001083807,NM_001083808,NM_02818872296
38.693933.8921116.47862.756814.4574
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018220
(v1.0)
Rusc1NM_001083807,NM_001083808,NM_02818872296
9.390285.7027811.6755
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018220
(v1.0)
Rusc1NM_001083807,NM_001083808,NM_02818872296
9.1658410.5949.95731
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018220
(v1.0)
Rusc1NM_001083807,NM_001083808,NM_02818872296
20.864229.2628
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018220
(v1.0)
Rusc1NM_001083807,NM_001083808,NM_02818872296
9.395745.6246710.9208
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018220
(v1.0)
Rusc1NM_001083807,NM_001083808,NM_02818872296
36.681631.704133.4153
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018220
(v1.0)
Rusc1NM_001083807,NM_001083808,NM_02818872296
39.252142.7018
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018220
(v1.0)
Rusc1NM_001083807,NM_001083808,NM_02818872296
0.10394513.3444
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018220
(v1.0)
Rusc1NM_001083807,NM_001083808,NM_02818872296
2.329940.411275
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018220
(v1.0)
5654H3004F12-3Mm.276872210403N08Rik72296
2210403N08Rik2.92282.75172.86832.91272.91542.84432.8424
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018220
(v1.0)
1434743_x_atMm.27687Rusc1NM_028188.2,NM_001083807.1,NM_001083808.172296
00117.425163.850
0018220
(v1.0)
1437991_x_atMm.27687Rusc1NM_028188.2,NM_001083807.1,NM_001083808.172296
000737.650
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018220
(v1.0)
A_51_P519756Rusc1NM_02818872296
11P0.6260.14P
0018220
(v1.0)
A_52_P236160Rusc1NM_02818872296
11P0.780.243P
Proteome N/A