DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018314
GeneSart3
Synonyms
Desc.squamous cell carcinoma antigen recognized by T cells 3
LocusNM_016926 chr5:114192455-114221658(-)
DB links


Entrez 53890
MGI 1858230
Ensembl ENSMUSG00000018974
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018847
(v2.0)
Sart3NM_01692653890
7.0159385.662928.563613.813110.932515.858311.074832.745713.639316.9329
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018314
(v1.0)
Sart353890
Maternal RNA0.98955
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018847
(v2.0)
Sart353890
880/5430.1834474/543-0.3116339/5432.8938818/5431.917513/543-3.2307118/543-2.7858
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018847
(v2.0)
Sart353890
528/2040.856261/2040.2382325/2044.194769/2043.22997/204-2.643868/204-2.1596
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018847
(v2.0)
Sart353890
117.55530338.8
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018847
(v2.0)
Sart353890
22.961519611.72
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018314
(v1.0)
Sart3NM_01692653890
89.034819.849410.27777.574977.76455
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018314
(v1.0)
Sart3NM_01692653890
472.08794.627367.663148.210650.4063
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018314
(v1.0)
Sart3NM_01692653890
93.0942.565821.6561
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018314
(v1.0)
Sart3NM_01692653890
90.86919.650124.327
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018314
(v1.0)
Sart3NM_01692653890
371.104646.677
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018314
(v1.0)
Sart3NM_01692653890
93.14812.5306626.6811
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018314
(v1.0)
Sart3NM_01692653890
9.515527.313939.47553
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018314
(v1.0)
Sart3NM_01692653890
74.0431132.618
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018314
(v1.0)
Sart3NM_01692653890
206.02212.7635
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018314
(v1.0)
Sart3NM_01692653890
63.063237.5682
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018314
(v1.0)
938C0163A04-3Mm.29594Sart353890
4.03954.02093.47583.84573.41923.61563.607
0018314
(v1.0)
19715L0295A04-3Mm.29594Sart353890
U026591NAP003299-001Sart3;TC858437,TC858436Q9R0P4U,F,24.24034.17223.63454.03293.5223.72613.7452
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018314
(v1.0)
1417547_atMm.29594Sart3NM_016926.153890
877.95819.35244.75381.7238.375
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018314
(v1.0)
A_51_P212023Sart3NM_01692653890
11P0.6920.168P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018314
(v1.0)
Sart353890
21432175