DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018338
GeneScaf11
SynonymsCASP11
Sfrs2ip
SIP1
SRRP129
Srsf2ip
Desc.SR-related CTD-associated factor 11
LocusNM_028148 chr15:96242129-96291274(-)
DB links


Entrez 72193
MGI 1919443
Ensembl ENSMUSG00000033228
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018872
(v2.0)
Scaf11NM_02814872193
11.324620.654230.888454.908840.819819.454339.722927.309838.337516.7654
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018338
(v1.0)
Scaf1172193
2-Cell Transient0.96803
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018872
(v2.0)
Scaf1172193
712/4390.1844483/4390.0216154/4392.0598401/4391.19632/439-1.6895256/439-1.3722
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018872
(v2.0)
Scaf1172193
381/1380.9473233/1380.6357145/1383.5608369/1382.728110/138-1.634283/138-1.3172
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018872
(v2.0)
Scaf1172193
66.000516939.05
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018872
(v2.0)
Scaf1172193
10.76049810.98
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018338
(v1.0)
Scaf11NM_02814872193
21.462121.35840.864228.279928.012
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018338
(v1.0)
Scaf11FR149031,FR324488,NM_02814872193
91.041489.3868346.533184.51131.743
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018338
(v1.0)
Scaf11NM_02814872193
22.44064.1415223.302
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018338
(v1.0)
Scaf11NM_02814872193
21.904321.143520.2136
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018338
(v1.0)
Scaf11FR149031,FR324488,NM_02814872193
80.716344.8336
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018338
(v1.0)
Scaf11NM_02814872193
22.45364.0847922.1696
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018338
(v1.0)
Scaf11NM_02814872193
37.833827.305426.5665
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018338
(v1.0)
Scaf11FR149031,FR324488,NM_02814872193
206.771175.472
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018338
(v1.0)
Scaf11NM_02814872193
21.319232.1047
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018338
(v1.0)
Scaf11NM_02814872193
5.456677.07465
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018338
(v1.0)
12573H3146E12-3Mm.277902610510E10Rik72193
U036592NAP094612-001TC887700Q9CSS1U,F,22.67362.77272.70862.72232.40892.6542.6444
0018338
(v1.0)
17979L0042B09-3Mm.277902610510E10Rik72193
U036592NAP094612-001TC920669Q9CSS1U,F,23.34273.38363.21623.24913.12013.21183.1956
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018338
(v1.0)
1452884_atMm.324474Scaf11NM_028148.272193
174.6250401.60135.675
0018338
(v1.0)
1434691_atMm.324474Scaf11NM_028148.272193
0000103.425
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018338
(v1.0)
A_51_P302507Sfrs2ipNM_02814872193
11P0.8320.317P
Proteome N/A