DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018492
GeneSec23ip
SynonymsD7Ertd373e
p125
Desc.Sec23 interacting protein
LocusNM_001029982 chr7:135888384-135928349(+)
DB links


Entrez 207352
MGI 2450915
Ensembl ENSMUSG00000055319
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
  •   1 Terms
      intracellular membrane-bounded organelle (GO:0043231)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019032
(v2.0)
Sec23ipNM_001029982207352
17.2630.34748.7442213.058811.78966.332815.7198.7030414.0536.87009
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018492
(v1.0)
Sec23ip207352
Maternal RNA0.95738
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019032
(v2.0)
Sec23ip207352
798/4680.2566540/4680.0901511/4683.69381446/4682.95247/468-1.2404278/468-1.346
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019032
(v2.0)
Sec23ip207352
292/1950.0693185/195-0.1911131/1952.951414/1952.402422/195-1.056582/195-1.8301
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019032
(v2.0)
Sec23ip207352
54.763713839.68
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019032
(v2.0)
Sec23ip207352
17.57817025.11
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018492
(v1.0)
Sec23ipNM_001029982207352
31.54896.011979.723418.1636711.1556
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018492
(v1.0)
Sec23ipNM_001029982207352
56.148728.826832.392226.175438.9427
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018492
(v1.0)
Sec23ipNM_001029982207352
32.98736.312146.55919
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018492
(v1.0)
Sec23ipNM_001029982207352
32.19885.95166.44828
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018492
(v1.0)
Sec23ipNM_001029982207352
20.78837.90796
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018492
(v1.0)
Sec23ipNM_001029982207352
33.00646.225697.07225
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018492
(v1.0)
Sec23ipNM_001029982207352
9.002367.882359.77517
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018492
(v1.0)
Sec23ipNM_001029982207352
122.462131.394
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018492
(v1.0)
Sec23ipNM_001029982207352
14.75113.5947
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018492
(v1.0)
Sec23ipNM_001029982207352
0.71801611.0032
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018492
(v1.0)
17761L0013F10-3Mm.21163LOC207352207352
U008835NAP002343-001TC887104,TC887103Q99KZ5U,F,22.74862.87063.15743.34082.8363.07492.8702
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018492
(v1.0)
1433627_atMm.297105Sec23ipNM_001029982.2207352
712.425421.25523.825351.7371.9
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018492
(v1.0)
A_51_P477440Sec23ipNM_001029982207352
11P0.9180.699P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018492
(v1.0)
Sec23ip207352
010010