DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018495
GeneSec24c
Synonyms
Desc.Sec24 related gene family, member C (S. cerevisiae)
LocusNM_172596 chr14:21493543-21514072(+)
NM_001168273 chr14:21493543-21514072(+)
DB links


Entrez 218811
MGI 1919746
Ensembl ENSMUSG00000039367
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Protein processing in endoplasmic reticulum (mmu04141)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019035
(v2.0)
Sec24cNM_001168273,NM_172596218811
37.832431.939934.66819.971925.388222.380627.687436.769721.935818.0635
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018495
(v1.0)
Sec24c218811
Maternal RNA0.86613
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019035
(v2.0)
Sec24c218811
553/406-0.0668407/406-0.1124140/4062.0328361/4061.156999/4060.0216630/4060.0344
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019035
(v2.0)
Sec24c218811
243/178-0.0634180/178-0.0995136/1783.1282339/1782.244721/178-0.9919121/178-1.1464
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019035
(v2.0)
Sec24c218811
60.346812349.06
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019035
(v2.0)
Sec24c218811
19.47658024.35
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018495
(v1.0)
Sec24cNM_001168273,NM_172596218811
33.208223.984514.846217.607919.3749
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018495
(v1.0)
Sec24cNM_001168273,NM_172596218811
246.425153.282126.336132.957125.256
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018495
(v1.0)
Sec24cNM_001168273,NM_172596218811
34.722213.834526.1676
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018495
(v1.0)
Sec24cNM_001168273,NM_172596218811
33.892323.743727.2423
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018495
(v1.0)
Sec24cNM_001168273,NM_172596218811
192.018315.181
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018495
(v1.0)
Sec24cNM_001168273,NM_172596218811
34.742413.64529.8784
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018495
(v1.0)
Sec24cNM_001168273,NM_172596218811
13.745317.001115.1768
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018495
(v1.0)
Sec24cNM_001168273,NM_172596218811
115.187133.778
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018495
(v1.0)
Sec24cNM_001168273,NM_172596218811
26.52146.90037
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018495
(v1.0)
Sec24cNM_001168273,NM_172596218811
3.233124.70864
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018495
(v1.0)
10835H3104C06-3Mm.173119LOC218811218811
U015365NAP095588-0012310021P13Rik;TC942958,TC858706,TC858705U,F,23.43163.61063.96913.78623.27113.68363.4025
0018495
(v1.0)
22025L0935E06-3Mm.173119LOC218811218811
U015365NAP095588-0012310021P13Rik;TC942958,TC858706,TC858705U,F,23.31353.29533.51553.57123.09663.4643.3906
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018495
(v1.0)
1452147_atMm.173119Sec24cNM_172596.2,NM_001168273.1218811
451.675355.325372.325388.05547.625
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018495
(v1.0)
A_51_P186564Sec24cNM_172596218811
11P0.9930.959P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018495
(v1.0)
Sec24c218811
241271